RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TMEM212A6NML5 194 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 IGHV3-7P01780 117 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 MTNR1BP49286 362 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 GTF2A1P52655 376 aaPredicted RBP19.49■□□□□ 0.71
PTCH1-210ENST00000468211 FOXB2Q5VYV0 432 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 ELP2Q6IA86 826 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 ZFP1Q6P2D0 407 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 OR52I1Q8NGK6 324 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 LEAP2Q969E1 77 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 MYDGFQ969H8 173 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 MRPL48Q96GC5 212 aaKnown RBP19.49■□□□□ 0.71
PTCH1-210ENST00000468211 ZNF581Q9P0T4 197 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 DHDHQ9UQ10 334 aa19.49■□□□□ 0.71
PTCH1-210ENST00000468211 TCRBV4S1A1TA0A5B7 111 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 GABRPO00591 440 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 FADS2O95864 444 aaKnown RBP19.48■□□□□ 0.71
PTCH1-210ENST00000468211 CEACAM3P40198 252 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 PRRX1P54821 245 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 ZNF529Q6P280 563 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 OR10K1Q8NGX5 313 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 CNIH3Q8TBE1 160 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 TSEN15Q8WW01 171 aaKnown RBP19.48■□□□□ 0.71
PTCH1-210ENST00000468211 APH1BQ8WW43 257 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 CAPSLQ8WWF8 208 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 OR6C3Q9NZP0 311 aa19.48■□□□□ 0.71
PTCH1-210ENST00000468211 CD33P20138 364 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 GLP1RP43220 463 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 ARHGDIBP52566 201 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 LOXL3P58215 753 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 RAB40BQ12829 278 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 DIAPH2-AS1Q14236 149 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 PAN3Q58A45 887 aaKnown RBP19.47■□□□□ 0.71
PTCH1-210ENST00000468211 PXT1Q8NFP0 134 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 OR9G1Q8NH87 305 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 PLPPR1Q8TBJ4 325 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 CREB3L1Q96BA8 519 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 TAS2R4Q9NYW5 299 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 CALYQ9NYX4 217 aa19.47■□□□□ 0.71
PTCH1-210ENST00000468211 MEIKINA0A087WXM9 373 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 CCDC159P0C7I6 412 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 LIMS3P0CW19 117 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 LIMS4P0CW20 117 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 PF4V1P10720 104 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 SOX2P48431 317 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 GBX2P52951 348 aaPredicted RBP19.46■□□□□ 0.71
PTCH1-210ENST00000468211 PIGYQ3MUY2 71 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 C9orf152Q5JTZ5 239 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 XAF1Q6GPH4 301 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 SATL1Q86VE3 508 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 TNFAIP8L1Q8WVP5 186 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 INPP5EQ9NRR6 644 aa19.46■□□□□ 0.71
PTCH1-210ENST00000468211 MRPS18AQ9NVS2 196 aaKnown RBP19.46■□□□□ 0.71
PTCH1-210ENST00000468211 TSSC4Q9Y5U2 329 aaPredicted RBP19.46■□□□□ 0.71
PTCH1-210ENST00000468211 TRAV39A0A0B4J263 110 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 LOC100130705A0A1B0GUX0 176 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 J3QR06 171 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 RAB3AP20336 220 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 RSBN1Q5VWQ0 802 aaPredicted RBP19.45■□□□□ 0.7
PTCH1-210ENST00000468211 RFESDQ8TAC1 157 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 Q96MT0 163 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 LINC00574Q9H8X3 128 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 FAM118AQ9NWS6 357 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 PSG11Q9UQ72 335 aa19.45■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A18PA6NE21 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A16PA6NEW6 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A20PA6NIJ5 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A9PA6NNJ1 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A12PA8MX19 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A5PA8MXJ8 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 OOSP1A8MZH6 123 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 MPZL2O60487 215 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 SNRNP70P08621 437 aaKnown RBP19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A15PP0C7V4 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A13PP0C7W8 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A14PP0C7W9 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 FAM90A24PP0C7X0 464 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 MNDAP41218 407 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 MRPL28Q13084 256 aaKnown RBP19.44■□□□□ 0.7
PTCH1-210ENST00000468211 SMN1Q16637 294 aaKnown RBP19.44■□□□□ 0.7
PTCH1-210ENST00000468211 LTC4SQ16873 150 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 CCDC144NLQ6NUI1 221 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 ASCL4Q6XD76 172 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 ZNF565Q8N9K5 539 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 Q8NFD4 153 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 OR56B4Q8NH76 319 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 MRGPRDQ8TDS7 321 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 TOMM40LQ969M1 308 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 RPEQ96AT9 228 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 MYCBPQ99417 103 aaPredicted RBP19.44■□□□□ 0.7
PTCH1-210ENST00000468211 GPER1Q99527 375 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 C9orf16Q9BUW7 83 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 JAM3Q9BX67 310 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 NCOR1P1Q9H4R4 102 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 IDI2-AS1Q9NZ38 188 aa19.44■□□□□ 0.7
PTCH1-210ENST00000468211 A0A1W2PPI3 338 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 NPIPB11E5RHQ5 1161 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 CDRT1O95170 752 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 IL1AP01583 271 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 IL13RA2Q14627 380 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 DRAM1Q8N682 238 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms