RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF729A6NN14 1252 aaPredicted RBP16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A9PA6NNJ1 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A12PA8MX19 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A5PA8MXJ8 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 CCDC159P0C7I6 412 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A15PP0C7V4 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A13PP0C7W8 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A14PP0C7W9 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A24PP0C7X0 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 SSTR5P35346 364 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 GNG10P50151 68 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 CCR9P51686 369 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 EGFEM1PQ0D2K5 195 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 PIGYQ3MUY2 71 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 DRAM1Q8N682 238 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 OR4D6Q8NGJ1 314 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 OR51T1Q8NGJ9 327 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 AKR1E2Q96JD6 320 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 DUX3Q96PT4 197 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 NR1H4Q96RI1 486 aaPredicted RBP16.3■□□□□ 0.2
COL6A1-203ENST00000466285 PDCD1LG2Q9BQ51 273 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 ZCCHC4Q9H5U6 513 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 IMPAD1Q9NX62 359 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 MOB4Q9Y3A3 225 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 HSPE1-MOB4S4R3N1 261 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 KBTBD11-OT1A0A1B0GTJ5 212 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 H0YJX3 145 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 H3BNX3 289 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 GABRPO00591 440 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 TOR1AO14656 332 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 DEGS1O15121 323 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 ZFPL1O95159 310 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 OCM2P0CE71 109 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 OCMP0CE72 109 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-203ENST00000466285 FCGR1AP12314 374 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 GABRB1P18505 474 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 KISS1Q15726 138 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 VAX1Q5SQQ9 334 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 C8orf86Q6ZUL3 223 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 LHFPL3Q86UP9 236 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 C5orf56Q8N8D9 126 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 TOMM40LQ969M1 308 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
COL6A1-203ENST00000466285 CYYR1Q96J86 154 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 HRASLS5Q96KN8 279 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 ALG8Q9BVK2 526 aa16.29■□□□□ 0.2
COL6A1-203ENST00000466285 EXOGQ9Y2C4 368 aaKnown RBP16.29■□□□□ 0.2
COL6A1-203ENST00000466285 TENM3Q9P273 2699 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 PSMB11A5LHX3 300 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 LINC01548A6NM66 108 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 HCKP08631 526 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 TMEM225BP0DP42 221 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 SNRPGP62308 76 aaKnown RBP16.28■□□□□ 0.2
COL6A1-203ENST00000466285 RPL23AP62750 156 aaKnown RBP16.28■□□□□ 0.2
COL6A1-203ENST00000466285 HNF4GQ14541 408 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 ZNF691Q5VV52 312 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
COL6A1-203ENST00000466285 OR9G1Q8NH87 305 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 RFESDQ8TAC1 157 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 UBALD1Q8TB05 177 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 MRGPRDQ8TDS7 321 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 PSG11Q9UQ72 335 aa16.28■□□□□ 0.2
COL6A1-203ENST00000466285 MEIKINA0A087WXM9 373 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 J3QR06 171 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 SULT1B1O43704 296 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 CEACAM3P40198 252 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 PAN3Q58A45 887 aaKnown RBP16.27■□□□□ 0.2
COL6A1-203ENST00000466285 XAF1Q6GPH4 301 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 ACBD7Q8N6N7 88 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 CHST4Q8NCG5 386 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 RPEQ96AT9 228 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 AMBNQ9NP70 447 aa16.27■□□□□ 0.2
COL6A1-203ENST00000466285 FUOMA2VDF0 154 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 IL1AP01583 271 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 VSIG8P0DPA2 414 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 DBTP11182 482 aaKnown RBP16.26■□□□□ 0.19
COL6A1-203ENST00000466285 THBS3P49746 956 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 DEFB121Q5J5C9 76 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 SLC25A30Q5SVS4 291 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 LCNL1Q6ZST4 164 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 OR2W3Q7Z3T1 314 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 KCTD20Q7Z5Y7 419 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 CNIH3Q8TBE1 160 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 IDI2-AS1Q9NZ38 188 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 OR6C3Q9NZP0 311 aa16.26■□□□□ 0.19
COL6A1-203ENST00000466285 HUWE1Q7Z6Z7 4374 aaKnown RBP16.25■□□□□ 0.19
COL6A1-203ENST00000466285 IGHV3-72A0A0B4J1Y9 119 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 IGKV1D-33P01593 117 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 IGKV1-33P01594 117 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 MNDAP41218 407 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 REG1BP48304 166 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 ARHGDIBP52566 201 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 GTF2A1P52655 376 aaPredicted RBP16.25■□□□□ 0.19
COL6A1-203ENST00000466285 PRRX1P54821 245 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 PARP16Q8N5Y8 322 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 ORAI1Q96D31 301 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 PCDHGB5Q9Y5G0 923 aa16.25■□□□□ 0.19
COL6A1-203ENST00000466285 OOSP1A8MZH6 123 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms