RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SLC35A2P78381 396 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 SLC25A53Q5H9E4 307 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 C10orf128Q5T292 105 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-205ENST00000465950 PNKDQ8N490 385 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 REG4Q9BYZ8 158 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 ZDHHC11Q9H8X9 412 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 CRIM1Q9NZV1 1036 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 TRIP11Q15643 1979 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 IGLV3-32A0A0A0MS00 114 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 KLF7O75840 302 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-205ENST00000465950 CCL2P13500 99 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 P2RX3P56373 397 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 TPPP2P59282 170 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 C18orf12Q96KH6 178 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 OR1A1Q9P1Q5 309 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 JPT1Q9UK76 154 aa8.17□□□□□ -1.1
SCAF11-205ENST00000465950 TBL2Q9Y4P3 447 aaKnown RBP8.17□□□□□ -1.1
SCAF11-205ENST00000465950 A0A1W2PQL4 384 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 H3BMQ9 156 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 M0R1W7 72 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 SYNGR1O43759 233 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 MITFO75030 526 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 PGA3P0DJD8 388 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 COX5AP20674 150 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 RPL8P62917 257 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 PSG4Q00888 419 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CDK5R1Q15078 307 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CD300LDQ6UXZ3 194 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR8I2Q8N0Y5 310 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TMEM104Q8NE00 496 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR8U1Q8NH10 309 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF385AQ96PM9 386 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF2Q9BSG1 426 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TRAPPC2P0DI81 140 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TRAPPC2BP0DI82 140 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 NSUN5P1Q3KNT7 163 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 APCDD1LQ8NCL9 501 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 SNRNP27Q8WVK2 155 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 WDR13Q9H1Z4 485 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 AKIRIN1Q9H9L7 192 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ST6GALNAC2Q9UJ37 374 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 PKIGQ9Y2B9 76 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CEP290O15078 2479 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ASPDHA6ND91 283 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 LIMS3P0CW19 117 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 LIMS4P0CW20 117 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CST9LP1Q5W188 147 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF66Q6ZN08 573 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR51E2Q9H255 320 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF275Q9NSD4 429 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ACOXLQ9NUZ1 547 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CLEC5AQ9NY25 188 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 HMX3A6NHT5 357 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 RNF223E7ERA6 249 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 M0R036 132 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 SPRY1O43609 319 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR5I1Q13606 314 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR10A7Q8NGE5 316 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 RNF133Q8WVZ7 376 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 R3HDM4Q96D70 268 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF486Q96H40 463 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 PLAC1Q9HBJ0 212 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 ZNF107Q9UII5 783 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 NEURL1O76050 574 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 HLA-AP01891 365 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 CLDN18P56856 261 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 FMODQ06828 376 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TM4SF20Q53R12 229 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 RIMKLAQ8IXN7 391 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 RFESDQ8TAC1 157 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
SCAF11-205ENST00000465950 OR2D2Q9H210 308 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 SLC45A2Q9UMX9 530 aa8.16□□□□□ -1.1
SCAF11-205ENST00000465950 TPRP12270 2363 aaKnown RBP8.15□□□□□ -1.1
SCAF11-205ENST00000465950 A0A0G2JNJ9 132 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 PSMB11A5LHX3 300 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 SLC17A2O00624 439 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 TRGV3P03979 118 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 CTLA4P16410 223 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 PSMB3P49720 205 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 LHX2P50458 406 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 MVDP53602 400 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 UBE2MP61081 183 aaKnown RBP8.15□□□□□ -1.1
SCAF11-205ENST00000465950 MOGAT2Q3SYC2 334 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 SLC25A47Q6Q0C1 308 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 OR52I1Q8NGK6 324 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 OR10K1Q8NGX5 313 aa8.15□□□□□ -1.1
SCAF11-205ENST00000465950 TMEM54Q969K7 222 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms