RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 J3QR06 171 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 AP4M1O00189 453 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 SULT1C4O75897 302 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 KDM4BO94953 1096 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 APOL3O95236 402 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
MCF2L-220ENST00000464800 OCM2P0CE71 109 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 OCMP0CE72 109 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-220ENST00000464800 ATF1P18846 271 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 HTR1FP30939 366 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 GLP1RP43220 463 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 RAB7AP51149 207 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 ATP6AP1Q15904 470 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 KDM4DQ6B0I6 523 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 UTS2BQ765I0 119 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 RDH10Q8IZV5 341 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 OR8H3Q8N146 312 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 PRSS35Q8N3Z0 413 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 OR10H4Q8NGA5 316 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 RFT1Q96AA3 541 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 SPSB1Q96BD6 273 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 ADAT3Q96EY9 351 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-220ENST00000464800 OPALINQ96PE5 141 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 GON7Q9BXV9 100 aa11.48□□□□□ -0.57
MCF2L-220ENST00000464800 PPIL3Q9H2H8 161 aaKnown RBP11.48□□□□□ -0.57
MCF2L-220ENST00000464800 ZNF256Q9Y2P7 627 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-220ENST00000464800 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 IGKV1-12A0A0C4DH73 117 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 SLC33A1O00400 549 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-220ENST00000464800 IGKV1D-12P01611 117 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 ZNF20P17024 532 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 PNLIPRP3Q17RR3 467 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 FAM220AQ7Z4H9 259 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 ZDHHC13Q8IUH4 622 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 LEAP2Q969E1 77 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 RHOFQ9HBH0 211 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 NEK6Q9HC98 313 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 SCOCQ9UIL1 159 aa11.47□□□□□ -0.57
MCF2L-220ENST00000464800 SIRT4Q9Y6E7 314 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-220ENST00000464800 ATP6V1E1P36543 226 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 POLR2IP36954 125 aaKnown RBP11.46□□□□□ -0.57
MCF2L-220ENST00000464800 KIR3DL2P43630 455 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 GPR12P47775 334 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 CDX1P47902 265 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-220ENST00000464800 GNG10P50151 68 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 FOXE3Q13461 319 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 GPR50Q13585 617 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 DOC2BQ14184 412 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 Q6P435 159 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 OR5D18Q8NGL1 313 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 RCHY1Q96PM5 261 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 GABARAPL1Q9H0R8 117 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 GNG8Q9UK08 70 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 PSG11Q9UQ72 335 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 SMAD5-AS1Q9Y6J3 95 aa11.46□□□□□ -0.57
MCF2L-220ENST00000464800 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
MCF2L-220ENST00000464800 HSPB6O14558 160 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 DEGS1O15121 323 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 LY86O95711 162 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 IL1AP01583 271 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 LYL1P12980 280 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 FASP25445 335 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 ISL1P61371 349 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 ZNF85Q03923 595 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 ZNF260Q3ZCT1 412 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 TP53I3Q53FA7 332 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 TMEM244Q5VVB8 128 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 TGIF2LXQ8IUE1 241 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 SAXO1Q8IYX7 474 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 OR10X1Q8NGY0 326 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-220ENST00000464800 FGGYQ96C11 551 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 CIB1Q99828 191 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
MCF2L-220ENST00000464800 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
MCF2L-220ENST00000464800 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 LCE6AA0A183 80 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 CCRL2O00421 344 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 HSD17B6O14756 317 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
MCF2L-220ENST00000464800 ELANEP08246 267 aa11.44□□□□□ -0.58
MCF2L-220ENST00000464800 CGB3P0DN86 165 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms