RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PMCHP20382 165 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TIA1P31483 386 aaKnown RBP eCLIP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ARRB1P49407 418 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CACNA1BQ00975 2339 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 PMPCAQ10713 525 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MLC1Q15049 377 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 NSDHLQ15738 373 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 PRSS53Q2L4Q9 553 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TCTN1Q2MV58 587 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CCDC144NLQ6NUI1 221 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TCF23Q7RTU1 214 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SHISA5Q8N114 240 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CSNK1A1LQ8N752 337 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 KLHDC1Q8N7A1 406 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SIGLECL1Q8N7X8 197 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR51A4Q8NGJ6 313 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SUN3Q8TAQ9 357 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 BLNKQ8WV28 456 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 C5orf30Q96GV9 206 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 BBC3Q96PG8 261 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 NAA38Q9BRA0 125 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 RSG1Q9BU20 258 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 LMF2Q9BU23 707 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SPON2Q9BUD6 331 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CHRNA10Q9GZZ6 450 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 GOLGA2P5Q9HBQ8 144 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MTCH1Q9NZJ7 389 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 FBXL7Q9UJT9 491 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 VDAC3Q9Y277 283 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 YIPF1Q9Y548 306 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR51B4Q9Y5P0 310 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 KCNE3Q9Y6H6 103 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ASH1LQ9NR48 2969 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 BDP1A6H8Y1 2624 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TRAV8-6A0A0B4J262 113 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MUC21A0A0G2JKD1 596 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MUC21A0A140T8X8 626 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 FAM230AA0A1W2PPH8 454 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 FAM166BA8MTA8 275 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SLC33A1O00400 549 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 HMGN4O00479 90 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SDCBPO00560 298 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 FGF10O15520 208 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 HCRTR1O43613 425 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 RPS4Y1P22090 263 aaKnown RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF93P35789 620 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 THPOP40225 353 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 GPR6P46095 362 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 P2RY1P47900 373 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SPOCK1Q08629 439 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ZP4Q12836 540 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TAF10Q12962 218 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MSMO1Q15800 293 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 GABRA6Q16445 453 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 CDKN3Q16667 212 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 HIST3H3Q16695 136 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 MUC21Q5SSG8 566 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 GPR157Q5UAW9 335 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 RAET1LQ5VY80 246 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR4C11Q6IEV9 310 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SLC8B1Q6J4K2 584 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 FAM71F2Q6NXP2 309 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 DNM1P46Q6ZS02 220 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SERPINA9Q86WD7 417 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 SLC35F2Q8IXU6 374 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 C1orf174Q8IYL3 243 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TCTEX1D1Q8N7M0 179 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF676Q8N7Q3 588 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 POC1AQ8NBT0 407 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 NPEPL1Q8NDH3 523 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR10G3Q8NGC4 313 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR2T10Q8NGZ9 312 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR10AC1Q8NH08 325 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR4K13Q8NH42 304 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 BAHD1Q8TBE0 780 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 DPF1Q92782 380 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TSSK2Q96PF2 358 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 OR2V2Q96R30 315 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 C19orf24Q9BVV8 132 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 Q9N2K0 584 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 RAB18Q9NP72 206 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 KIAA1456Q9P272 454 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TIMM13Q9Y5L4 95 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 TSSC4Q9Y5U2 329 aaPredicted RBP3.13□□□□□ -1.91
COL8A1-205ENST00000463753 PLXNB3Q9ULL4 1909 aa3.13□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF716A6NP11 495 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HSPB2A8KAH6 182 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CEBPZOSA8MTT3 80 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 F2Z2F3 143 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 K7N7A8 449 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CDIPTO14735 213 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SCGB2A1O75556 95 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TNFSF15O95150 251 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CLDN1O95832 211 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 EPPINO95925 133 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 NUDT3O95989 172 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PFN1P07737 140 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PNMTP11086 282 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TCN2P20062 427 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms