RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CDK2P24941 298 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 PAX6P26367 422 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 MAPK3P27361 379 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-202ENST00000463440 KCNJ3P48549 501 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 GPR176Q14439 515 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 FAM189A2Q15884 450 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 SSX2Q16385 188 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 NHLRC3Q5JS37 347 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 MINOS1Q5TGZ0 78 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 PRAMEF5Q5TYX0 476 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 DERL3Q96Q80 235 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 BARHL1Q9BZE3 327 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 C16orf95Q9H693 158 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 ABCB10Q9NRK6 738 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 MINOS1-NBL1R4GNA1 71 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 KIAA2026Q5HYC2 2103 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 MMP23AO75900 390 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 SERPINA2P20848 420 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 MYF6P23409 242 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 HSPA13P48723 471 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 RBM11P57052 281 aaKnown RBP13.14□□□□□ -0.31
COL1A1-202ENST00000463440 DOC2BQ14184 412 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 SLC22A6Q4U2R8 563 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 PLA1AQ53H76 456 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 CDH26Q8IXH8 852 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 DYNAPQ8N1N2 210 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 ABHD12Q8N2K0 398 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 JAGN1Q8N5M9 183 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 ZNF565Q8N9K5 539 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 NDNFQ8TB73 568 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 PPIL3Q9H2H8 161 aaKnown RBP13.14□□□□□ -0.31
COL1A1-202ENST00000463440 NCOR1P1Q9H4R4 102 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
COL1A1-202ENST00000463440 MEIKINA0A087WXM9 373 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MAGEA13PA6NCF6 341 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 OR7C1O76099 320 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MAS1P04201 325 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 GTF2F2P13984 249 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 HTR1DP28221 377 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 GLP1RP43220 463 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 SLC35A2P78381 396 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 SPHARQ15513 63 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MED22Q15528 200 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 BRICD5Q6PL45 260 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MS4A15Q8N5U1 240 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 ZNF596Q8TC21 504 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MUL1Q969V5 352 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 DPCDQ9BVM2 203 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-202ENST00000463440 IFT22Q9H7X7 185 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 KIF25Q9UIL4 384 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 MRPS28Q9Y2Q9 187 aaKnown RBP13.13□□□□□ -0.31
COL1A1-202ENST00000463440 HILPDAQ9Y5L2 63 aa13.13□□□□□ -0.31
COL1A1-202ENST00000463440 KBTBD11-OT1A0A1B0GTJ5 212 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 PIN1P1O15428 100 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 DYNLT3P51808 116 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 PROK1P58294 105 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 PAX5Q02548 391 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 MPV17LQ2QL34 196 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 GLIPR1L1Q6UWM5 242 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 IZUMO2Q6UXV1 221 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 NKAIN3Q8N8D7 197 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 DTX3Q8N9I9 347 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 SUMF2Q8NBJ7 301 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 OR4C13Q8NGP0 309 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 PITPNC1Q9UKF7 332 aa13.12□□□□□ -0.31
COL1A1-202ENST00000463440 LSM2Q9Y333 95 aaKnown RBP13.12□□□□□ -0.31
COL1A1-202ENST00000463440 MEGF11A6BM72 1044 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 TOR1AO14656 332 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 GEMIN2O14893 280 aaKnown RBP13.11□□□□□ -0.31
COL1A1-202ENST00000463440 RGS10O43665 173 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 CD34P28906 385 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 GABRA5P31644 462 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 RAB13P51153 203 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 PRRX1P54821 245 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
COL1A1-202ENST00000463440 GPR50Q13585 617 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 IRF3Q14653 427 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 ATAD3CQ5T2N8 411 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-202ENST00000463440 AWAT2Q6E213 333 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 BAIAP2L2Q6UXY1 529 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 PLPPR1Q8TBJ4 325 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 SGCDQ92629 289 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 CREB3L1Q96BA8 519 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 MRPS24Q96EL2 167 aaKnown RBP13.11□□□□□ -0.31
COL1A1-202ENST00000463440 CITED1Q99966 193 aa13.11□□□□□ -0.31
COL1A1-202ENST00000463440 TMED9Q9BVK6 235 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms