RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CHST1O43916 411 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ID4P47928 161 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM240Q5SV17 173 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 FOXB2Q5VYV0 432 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF502Q8TBZ5 544 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 SF3B5Q9BWJ5 86 aaKnown RBP7.94□□□□□ -1.14
BRCA1-205ENST00000461221 NALCNQ8IZF0 1738 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1B0GU03 582 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MED19A0JLT2 244 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-205ENST00000461221 DIRC3C9JPN6 131 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 GABRG2P18507 467 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 PCMT1P22061 227 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 NMUP48645 174 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 SLC23A3Q6PIS1 610 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ANKRD33Q7Z3H0 272 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MTURNQ8N3F0 131 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 DEFB123Q8N688 67 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF383Q8NA42 475 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 BVESQ8NE79 360 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 OR1L8Q8NGR8 309 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TMUB1Q9BVT8 246 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ELOVL1Q9BW60 279 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 SLC52A3Q9NQ40 469 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ARG1P05089 322 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 HOXA6P31267 233 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM196Q5HYL7 178 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 LRRC75AQ8NAA5 344 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 GNRHR2Q96P88 292 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 RHNO1Q9BSD3 238 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-205ENST00000461221 PAGE4O60829 102 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 CA11O75493 328 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MAS1LP35410 378 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 RTP5Q14D33 572 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MPV17LQ2QL34 196 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 OR4A47Q6IF82 309 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 CLEC18BQ6UXF7 455 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 SSMEM1Q8WWF3 244 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ASB10Q8WXI3 467 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MRPL13Q9BYD1 178 aaKnown RBP7.94□□□□□ -1.14
BRCA1-205ENST00000461221 WDR13Q9H1Z4 485 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 KNDC1Q76NI1 1749 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM210A6NLX4 147 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 CRHP06850 196 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 ROM1Q03395 351 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 MRPL58Q14197 206 aaKnown RBP7.94□□□□□ -1.14
BRCA1-205ENST00000461221 TWIST1Q15672 202 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 PTX4Q96A99 478 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 INSIG2Q9Y5U4 225 aa7.94□□□□□ -1.14
BRCA1-205ENST00000461221 AKAP12Q02952 1782 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 FXYD1O00168 92 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 CDS2O95674 445 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 CD74P04233 296 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF735P0CB33 412 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 LSM6P62312 80 aaKnown RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 C16orf82Q7Z2V1 217 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 MRPL30Q8TCC3 161 aaKnown RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 ADAMTS17Q8TE56 1095 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 FAM222BQ8WU58 562 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 MRAP2Q96G30 205 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 HARBI1Q96MB7 349 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 GPR61Q9BZJ8 451 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 PARP11Q9NR21 331 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 BTF3P20290 206 aaKnown RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 RRN3P1Q2M238 152 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 PRICKLE4Q2TBC4 344 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 SSX8Q7RTT4 187 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF738Q8NE65 137 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 OR8B12Q8NGG6 310 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 VN1R17PQ8TDU5 208 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 CXCL16Q9H2A7 254 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 SAP30LQ9HAJ7 183 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 TMEFF2Q9UIK5 374 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM189A5PLL7 270 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 FAM3BP58499 235 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 EWSR1Q01844 656 aaKnown RBP eCLIP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 HERPUD1Q15011 391 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PRD5 423 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PRF3 423 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PRM7 423 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 H3BQ15 152 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 MT-ND6P03923 174 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 JOSD1Q15040 202 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 GABRA6Q16445 453 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 WDR25Q64LD2 544 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 SEZ6L2Q6UXD5 910 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 TBX21Q9UL17 535 aa7.93□□□□□ -1.14
BRCA1-205ENST00000461221 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-205ENST00000461221 TCF21O43680 179 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 SS18L1O75177 396 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 GALNSP34059 522 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PLP1P60201 277 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 RAC3P60763 192 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 CIRBPQ14011 172 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms