RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 A0A0B4J2E0 115 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 TRBV4-1A0A0J9YWV2 114 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 A0A1B0GX12 115 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 COLCA2A8K830 154 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CCSO14618 274 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 BCKDKO14874 412 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR2T1O43869 369 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 NDUFS7O75251 213 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CLDN1O95832 211 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CLIC3O95833 236 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CH25HO95992 272 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTL6AO96019 429 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 PNPP00491 289 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CFDP00746 253 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 IFNA21P01568 189 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 IGHV3-9P01782 118 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 MT-ND2P03891 347 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SEMG1P04279 462 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GIPP09681 153 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR2T7P0C7T2 308 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 HLA-DOBP13765 273 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GABRA1P14867 456 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CPN1P15169 458 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF44P15621 663 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF14P17017 642 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GADD45AP24522 165 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CXCR1P25024 350 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 HTR2CP28335 458 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SDC2P34741 201 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GLP1RP43220 463 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CCR6P51684 374 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 POLR2HP52434 150 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 TAS2R41P59536 307 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 LSM3P62310 102 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SELENOWP63302 87 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR7A5Q15622 319 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SGCBQ16585 318 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GUK1Q16774 197 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF674Q2M3X9 581 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 IFI44LQ53G44 452 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SYT14P1Q58G82 188 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 PYY3Q5JQD4 70 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 C9orf135Q5VTT2 229 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OTPQ5XKR4 325 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CYB5R2Q6BCY4 276 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR8G2PQ6IF36 304 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 LAIR2Q6ISS4 152 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 FAHD2BQ6P2I3 314 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM131AQ6UXB0 335 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 Q6ZPB1 254 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF550Q7Z398 422 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 NUFIP2Q7Z417 695 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GRINAQ7Z429 371 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM179BQ7Z7N9 219 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF573Q86YE8 665 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 HS3ST5Q8IZT8 346 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 FTMTQ8N4E7 242 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SPICQ8N5J4 248 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GCSAMQ8N6F7 178 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 RELL2Q8NC24 303 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR5D18Q8NGL1 313 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR6K3Q8NGY3 331 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR2G2Q8NGZ5 317 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR4Q3Q8NH05 313 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ST8SIA1Q92185 356 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 UPRTQ96BW1 309 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 FAHD2AQ96GK7 314 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SLC41A3Q96GZ6 507 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 URB1-AS1Q96HZ7 61 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 PYURFQ96I23 114 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CXorf58Q96LI9 332 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 MBOAT4Q96T53 435 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 PITX2Q99697 317 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 GPA33Q99795 319 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SOSTQ9BQB4 213 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 PIGQQ9BRB3 760 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM43Q9BTV4 400 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 OR51J1Q9H342 316 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 NOX3Q9HBY0 568 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 MEPEQ9NQ76 525 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 EXOSC3Q9NQT5 275 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 SLCO1C1Q9NYB5 712 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CLCF1Q9UBD9 225 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 RPS6KB2Q9UBS0 482 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF629Q9UEG4 869 aaPredicted RBP4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 CHRNA9Q9UGM1 479 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 NAGKQ9UJ70 344 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 LRP12Q9Y561 859 aa4.1□□□□□ -1.75
ATPAF1-203ENST00000460928 HCFC1P51610 2035 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 PLCE1Q9P212 2302 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 A0A087WUJ7 227 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 A0A087WUU8 490 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 A4D1N5 150 aa4.09□□□□□ -1.75
ATPAF1-203ENST00000460928 SLC22A20A6NK97 555 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms