RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CCRL2O00421 344 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ACOX3O15254 700 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SLC31A1O15431 190 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ALOX12BO75342 701 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 CDRT1O95170 752 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SERPINA1P01009 418 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 CDK1P06493 297 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 OR5AL1P0C617 328 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 PRSS3P35030 304 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 FUT5Q11128 374 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 TAF1AQ15573 450 aaPredicted RBP3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SLC9A3R2Q15599 337 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SMIM15Q7Z3B0 74 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ORMDL3Q8N138 153 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ZCCHC24Q8N2G6 241 aaKnown RBP3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SLC35G3Q8N808 338 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ACBD4Q8NC06 268 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 OR2Z1Q8NG97 314 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 OR2AE1Q8NHA4 323 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ZFAND1Q8TCF1 268 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 DYNC2LI1Q8TCX1 351 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 FAM172AQ8WUF8 416 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 IP6K3Q96PC2 410 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 C6orf62Q9GZU0 229 aaPredicted RBP3.09□□□□□ -1.91
CCDC50-203ENST00000460064 PLEKHF2Q9H8W4 249 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 TMBIM4Q9HC24 238 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 ABCB9Q9NP78 766 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 SNX24Q9Y343 169 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 MTCH2Q9Y6C9 303 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 NPHP4O75161 1426 aaPredicted RBP3.09□□□□□ -1.92
CCDC50-203ENST00000460064 LOC102724200A0A096LPH7 203 aaPredicted RBP3.08□□□□□ -1.92
CCDC50-203ENST00000460064 A0A1B0GX12 115 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 ZNF233A6NK53 670 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 OR2AT4A6NND4 320 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 CEACAM18A8MTB9 384 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 A8MWL6 223 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 C2orf74A8MZ97 194 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 F5H5T6 163 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 NDUFS5O43920 106 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 MPZL2O60487 215 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 MAS1P04201 325 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 LIPCP11150 499 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 PSMB2P49721 201 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 CLDN12P56749 244 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 RANP62826 216 aaKnown RBP3.08□□□□□ -1.92
CCDC50-203ENST00000460064 ADIGQ0VDE8 80 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 DYNC1I2Q13409 638 aaKnown RBP3.08□□□□□ -1.92
CCDC50-203ENST00000460064 RAB31Q13636 194 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 BSXQ3C1V8 233 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 ACSM3Q53FZ2 586 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 TTC32Q5I0X7 151 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 HACD4Q5VWC8 232 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 C3orf33Q6P1S2 294 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 CASP12Q6UXS9 341 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 Q6ZT83 130 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 CCDC121Q6ZUS5 278 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 LYG2Q86SG7 212 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 TRAPPC5Q8IUR0 188 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 STK40Q8N2I9 435 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 SLC25A29Q8N8R3 303 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 ST20-AS1Q8NBB2 130 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 OR2D3Q8NGH3 330 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 OR10J5Q8NHC4 309 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 PIGXQ8TBF5 258 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 PPWD1Q96BP3 646 aaKnown RBP3.08□□□□□ -1.92
CCDC50-203ENST00000460064 NIPSNAP1Q9BPW8 284 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 C20orf144Q9BQM9 153 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 COPS4Q9BT78 406 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 TBL1XR1Q9BZK7 514 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 SLC7A11Q9UPY5 501 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 GINS2Q9Y248 185 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 ORC6Q9Y5N6 252 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 RAB3GAP2Q9H2M9 1393 aa3.08□□□□□ -1.92
CCDC50-203ENST00000460064 TICRRQ7Z2Z1 1910 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 IGHV6-1A0A0B4J1U7 121 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 A0A0G2JMP0 313 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 A0A0X1KG70 313 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 A8MUU9 505 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 C21orf140B9A014 251 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 FTCDNL1E5RQL4 147 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 ENSAO43768 121 aaKnown RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 HPGDSO60760 199 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 DHFRP00374 187 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 CD28P10747 220 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 ZNF14P17017 642 aaPredicted RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 NTF3P20783 257 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 PAX6P26367 422 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 OMPP47874 163 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 RAP1GDS1P52306 607 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 RHOAP61586 193 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 GRB2P62993 217 aaKnown RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 FAM3AP98173 230 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 IL5RAQ01344 420 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 PRKCDQ05655 676 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 LAMTOR4Q0VGL1 99 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 SRSF6Q13247 344 aaKnown RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 PDZD11Q5EBL8 140 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 OR10J3Q5JRS4 329 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms