RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 HAND1O96004 215 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 AMY2BP19961 511 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 DUSP1P28562 367 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 PITPNBP48739 271 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 SNU13P55769 128 aaKnown RBP12.88□□□□□ -0.35
SDF4-204ENST00000459994 PAX8Q06710 450 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 ZNF841Q6ZN19 808 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 DCDC5Q6ZRR9 648 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 BPIFB2Q8N4F0 458 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 TAF15Q92804 592 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDF4-204ENST00000459994 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
SDF4-204ENST00000459994 ATG5Q9H1Y0 275 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 MIXL1Q9H2W2 232 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
SDF4-204ENST00000459994 A0A0A6YYD4 124 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 RAB27BO00194 218 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
SDF4-204ENST00000459994 GYPAP02724 150 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 GLAP06280 429 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 GNB2P62879 340 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 ACTG1P63261 375 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 IKZF1Q13422 519 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 LINC00299Q6ZSB3 139 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 ZFAND2BQ8WV99 257 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 NEIL1Q96FI4 390 aaPredicted RBP12.87□□□□□ -0.35
SDF4-204ENST00000459994 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
SDF4-204ENST00000459994 MED30Q96HR3 178 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 NICN1Q9BSH3 213 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
SDF4-204ENST00000459994 MIOXQ9UGB7 285 aa12.87□□□□□ -0.35
SDF4-204ENST00000459994 IGHV2-70DA0A0C4DH43 119 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 C22orf46C9J442 243 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 SIGLEC5O15389 551 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 SOCS1O15524 211 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 RGS5O15539 181 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 PDCD6O75340 191 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 OR2H2O95918 312 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 EIF4EP06730 217 aaKnown RBP12.86□□□□□ -0.35
SDF4-204ENST00000459994 ZNF44P15621 663 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 ELK1P19419 428 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 FUT3P21217 361 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 GABRR1P24046 479 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 CHATP28329 748 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 BLVRBP30043 206 aaPredicted RBP12.86□□□□□ -0.35
SDF4-204ENST00000459994 S100A5P33763 92 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 GABRA2P47869 451 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 VEGFCP49767 419 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 TMEM50BP56557 158 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 UBA52P62987 128 aaKnown RBP12.86□□□□□ -0.35
SDF4-204ENST00000459994 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 OR6Q1Q8NGQ2 317 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 GAFA1Q96PS6 74 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 NEDD4LQ96PU5 975 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 CCL13Q99616 98 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 NUP50Q9UKX7 468 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 HSF4Q9ULV5 492 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
SDF4-204ENST00000459994 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 A0A1B0GW55 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
SDF4-204ENST00000459994 ZNF737O75373 536 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 TPPPO94811 219 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
SDF4-204ENST00000459994 IL13RA1P78552 427 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 COL10A1Q03692 680 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 SCN1BQ07699 218 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 ARL6IP1Q15041 203 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 PDCD1Q15116 288 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 MOGAT2Q3SYC2 334 aa12.85□□□□□ -0.35
SDF4-204ENST00000459994 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
SDF4-204ENST00000459994 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms