RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 HS3ST1O14792 307 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 DLEU1O43261 78 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 FBXO24O75426 580 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 RORCP51449 518 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 PPP3R1P63098 170 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 C3orf36Q3SXR2 165 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 TMEM42Q69YG0 159 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 POC5Q8NA72 575 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 SYNPRQ8TBG9 265 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 LRRC46Q96FV0 321 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 PERPQ96FX8 193 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 COMMD3Q9UBI1 195 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 PURGQ9UJV8 347 aaKnown RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 TBC1D24Q9ULP9 559 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 FOXJ3Q9UPW0 622 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 V9GY05 133 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 ZNF816-ZNF321PA0A0X1KG74 233 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 IFITM5A6NNB3 132 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 MLNRO43193 412 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 SPRY1O43609 319 aaPredicted RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 ANGPTL7O43827 346 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 TIMM8AO60220 97 aaPredicted RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 OR4A8P0C604 315 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 FSTP19883 344 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 AZGP1P25311 298 aaKnown RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 ERP29P30040 261 aaKnown RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 GLRXP35754 106 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 OR3A4PP47883 348 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 RBP2P50120 134 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 GPM6AP51674 278 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 FGF8P55075 233 aaPredicted RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 SNU13P55769 128 aaKnown RBP8.77□□□□□ -1.01
USP39-210ENST00000459775 RAB11AP62491 216 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 ARL6IP1Q15041 203 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 RAB11BQ15907 218 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 ZNF718Q3SXZ3 478 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 LYPD6Q86Y78 171 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 MCFD2Q8NI22 146 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 FAM222BQ8WU58 562 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 ABCB9Q9NP78 766 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 TMEM138Q9NPI0 162 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 MTCH1Q9NZJ7 389 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 SMPXQ9UHP9 88 aa8.77□□□□□ -1.01
USP39-210ENST00000459775 PLCE1Q9P212 2302 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 A0A1W2PP11 408 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 F5H5P2 479 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 LANCL1O43813 399 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 DFFBO76075 338 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 CD3EP07766 207 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 KISS1Q15726 138 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 DGUOKQ16854 277 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 FAHD2BQ6P2I3 314 aaPredicted RBP8.76□□□□□ -1.01
USP39-210ENST00000459775 SPNS3Q6ZMD2 512 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 CALHM1Q8IU99 346 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 OR51D1Q8NGF3 324 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 OR10K1Q8NGX5 313 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
USP39-210ENST00000459775 RAB24Q969Q5 203 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 FAHD2AQ96GK7 314 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 GEMIN7Q9H840 131 aaKnown RBP8.76□□□□□ -1.01
USP39-210ENST00000459775 ZNF391Q9UJN7 358 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 ABCA4P78363 2273 aa8.76□□□□□ -1.01
USP39-210ENST00000459775 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 ANKRD30BLA7E2S9 258 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 SMLR1H3BR10 107 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 HPGDSO60760 199 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZNF250P15622 560 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 IGFBP2P18065 325 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZNF93P35789 620 aaPredicted RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 EFNB2P52799 333 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 MTCP1P56278 107 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZNF404Q494X3 552 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 MBNL2Q5VZF2 373 aaKnown RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 WDR86Q86TI4 376 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 LAX1Q8IWV1 398 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 PP6455Q8WZ26 134 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 FAM46BQ96A09 425 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 MIXL1Q9H2W2 232 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZNF430Q9H8G1 570 aaPredicted RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 TAAR3PQ9P1P4 343 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 RNF115Q9Y4L5 304 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 PKDREJQ9NTG1 2253 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CELSR2Q9HCU4 2923 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CACNA1DQ01668 2161 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 LOC100289279A0A1B0GTE1 492 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 IQCF6A8MYZ5 107 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZNF732B4DXR9 585 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 RGS5O15539 181 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 SPRY3O43610 288 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CST4P01036 141 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 PAX6P26367 422 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 SSTR2P30874 369 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 KLF3P57682 345 aaPredicted RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 BSXQ3C1V8 233 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CST9LP1Q5W188 147 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 ZDHHC23Q8IYP9 409 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 LGALS14Q8TCE9 139 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 OR5P3Q8WZ94 311 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms