RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 GABRA5P31644 462 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 LGALS4P56470 323 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 RBM11P57052 281 aaKnown RBP16.88■□□□□ 0.29
VARS-218ENST00000459667 GPR176Q14439 515 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 SLC22A6Q4U2R8 563 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 HSD17B12Q53GQ0 312 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 NHLRC3Q5JS37 347 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 BEND2Q8NDZ0 799 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 TAF15Q92804 592 aaKnown RBP eCLIP16.88■□□□□ 0.29
VARS-218ENST00000459667 ANK2Q01484 3957 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 TRAV24A0A0B4J272 114 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 SC5DO75845 299 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 ARL6IP5O75915 188 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 CRYBA1P05813 215 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 RPS25P62851 125 aaKnown RBP16.87■□□□□ 0.29
VARS-218ENST00000459667 FAM27D1Q5T7N8 215 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 ZNF773Q6PK81 442 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 GLIPR1L1Q6UWM5 242 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 SPARTQ8N0X7 666 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 DYRK2Q92630 601 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 FOXRED1Q96CU9 486 aaPredicted RBP16.87■□□□□ 0.29
VARS-218ENST00000459667 UQCC2Q9BRT2 126 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 GAL3ST2Q9H3Q3 398 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 SESN1Q9Y6P5 492 aa16.87■□□□□ 0.29
VARS-218ENST00000459667 A0A1W2PP11 408 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 OR7C1O76099 320 aaPredicted RBP16.86■□□□□ 0.29
VARS-218ENST00000459667 ARG1P05089 322 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 UCHL1P09936 223 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 GTF2F2P13984 249 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 TAF9Q16594 264 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 KCTD21Q4G0X4 260 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 GLT8D1Q68CQ7 371 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 AWAT2Q6E213 333 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 LINC00596Q86U02 117 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 C3orf56Q8N813 242 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 OR4D6Q8NGJ1 314 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 CORO2AQ92828 525 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 AJUBAQ96IF1 538 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 PPIL3Q9H2H8 161 aaKnown RBP16.86■□□□□ 0.29
VARS-218ENST00000459667 TAS2R3Q9NYW6 316 aa16.86■□□□□ 0.29
VARS-218ENST00000459667 ODF3BA8MYP8 253 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 HAX1O00165 279 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 GEMIN2O14893 280 aaKnown RBP16.85■□□□□ 0.29
VARS-218ENST00000459667 GPR137BO60478 399 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 SRMP19623 302 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 CFPP27918 469 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 PSMB9P28065 219 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 GP2P55259 537 aaKnown RBP16.85■□□□□ 0.29
VARS-218ENST00000459667 PRAMEF5Q5TYX0 476 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 UBE2UQ5VVX9 321 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 ZNF626Q68DY1 528 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 LHFPL4Q7Z7J7 247 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 LYPD6Q86Y78 171 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 SUMF2Q8NBJ7 301 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 OR11H6Q8NGC7 330 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 OR5R1Q8NH85 324 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 DPCDQ9BVM2 203 aaPredicted RBP16.85■□□□□ 0.29
VARS-218ENST00000459667 IFT22Q9H7X7 185 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 OR6C3Q9NZP0 311 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 ZNF581Q9P0T4 197 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 VPREB3Q9UKI3 123 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 KIAA2026Q5HYC2 2103 aa16.85■□□□□ 0.29
VARS-218ENST00000459667 MMP23AO75900 390 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 OMGP23515 440 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 KCNJ3P48549 501 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 RPL15P61313 204 aaKnown RBP16.84■□□□□ 0.29
VARS-218ENST00000459667 DYNC1I2Q13409 638 aaKnown RBP16.84■□□□□ 0.29
VARS-218ENST00000459667 MPV17LQ2QL34 196 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 PLPPR1Q8TBJ4 325 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 BARHL1Q9BZE3 327 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 TMEM133Q9H2Q1 129 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 NDUFB11Q9NX14 153 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 GHRLQ9UBU3 117 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 KIF25Q9UIL4 384 aa16.84■□□□□ 0.29
VARS-218ENST00000459667 TBL2Q9Y4P3 447 aaKnown RBP16.84■□□□□ 0.29
VARS-218ENST00000459667 MEIKINA0A087WXM9 373 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 IGHV2-26A0A0B4J1V2 119 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 ZNF729A6NN14 1252 aaPredicted RBP16.83■□□□□ 0.28
VARS-218ENST00000459667 H3BUX3 64 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 CCRL2O00421 344 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 CDK2P24941 298 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 PAX6P26367 422 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 GLP1RP43220 463 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 LRRC75BQ2VPJ9 315 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 ATAD3CQ5T2N8 411 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 RSBN1Q5VWQ0 802 aaPredicted RBP16.83■□□□□ 0.28
VARS-218ENST00000459667 OR52W1Q6IF63 320 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 HEPN1Q6WQI6 88 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 TMEM91Q6ZNR0 172 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 GDPGP1Q6ZNW5 385 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 LRRTM1Q86UE6 522 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 MRPS24Q96EL2 167 aaKnown RBP16.83■□□□□ 0.28
VARS-218ENST00000459667 SSX3Q99909 188 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 CLEC7AQ9BXN2 247 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 MEGF9Q9H1U4 602 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 C1RLQ9NZP8 487 aa16.83■□□□□ 0.28
VARS-218ENST00000459667 FAM90A8PA6NJQ4 464 aa16.82■□□□□ 0.28
VARS-218ENST00000459667 UBBP0CG47 229 aa16.82■□□□□ 0.28
VARS-218ENST00000459667 RANBP1P43487 201 aa16.82■□□□□ 0.28
VARS-218ENST00000459667 RAG2P55895 527 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms