RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FSTP19883 344 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
CPSF6-203ENST00000456847 BAIAP2L2Q6UXY1 529 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 ASCL4Q6XD76 172 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 JAGN1Q8N5M9 183 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 CITED1Q99966 193 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 TCF7L1Q9HCS4 588 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 FKBP14Q9NWM8 211 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 IL36GQ9NZH8 169 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 KIF25Q9UIL4 384 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 MEIKINA0A087WXM9 373 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-203ENST00000456847 CDK1P06493 297 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 HTR1DP28221 377 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 RAB13P51153 203 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 RBM11P57052 281 aaKnown RBP13.11□□□□□ -0.31
CPSF6-203ENST00000456847 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 LDLRAD2Q5SZI1 272 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF596Q8TC21 504 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 NRG4Q8WWG1 115 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 MYDGFQ969H8 173 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 BARHL1Q9BZE3 327 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-203ENST00000456847 PCDHB16Q9NRJ7 776 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 PITPNC1Q9UKF7 332 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 TCF19Q9Y242 345 aa13.11□□□□□ -0.31
CPSF6-203ENST00000456847 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 TOR1AO14656 332 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 TIMM23O14925 209 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 CHST1O43916 411 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 MAS1P04201 325 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 NFYBP25208 207 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 GDNFP39905 211 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 SLC22A6Q4U2R8 563 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 C6orf141Q5SZD1 244 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 OR2T6Q8NHC8 308 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 PIFOQ8TCI5 191 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 THRSPQ92748 146 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 MUL1Q969V5 352 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
CPSF6-203ENST00000456847 M0QZ24 198 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF780AO75290 641 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-203ENST00000456847 GPX5O75715 221 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 MAPK3P27361 379 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-203ENST00000456847 KCNJ3P48549 501 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF565Q8N9K5 539 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 SUMF2Q8NBJ7 301 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 Q8NFD4 153 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 OR4P4Q8NGL7 312 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 DERL3Q96Q80 235 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 DPCDQ9BVM2 203 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF286AQ9HBT8 521 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 FOXJ3Q9UPW0 622 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 MRPS28Q9Y2Q9 187 aaKnown RBP13.09□□□□□ -0.31
CPSF6-203ENST00000456847 SIGLEC9Q9Y336 463 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 CD1AP06126 327 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-203ENST00000456847 GPR176Q14439 515 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 C17orf58Q2M2W7 97 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 ATAD3CQ5T2N8 411 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 AWAT2Q6E213 333 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 PLPPR1Q8TBJ4 325 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 CALYQ9NYX4 217 aa13.09□□□□□ -0.31
CPSF6-203ENST00000456847 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 A0A1W2PP11 408 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 H0YHG0 523 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
CPSF6-203ENST00000456847 GTF2F2P13984 249 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 ARHGDIBP52566 201 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 BDH1Q02338 343 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 DOC2BQ14184 412 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 RBM39Q14498 530 aaKnown RBP13.08□□□□□ -0.32
CPSF6-203ENST00000456847 LTC4SQ16873 150 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 RSBN1Q5VWQ0 802 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-203ENST00000456847 DTX3Q8N9I9 347 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 MRGPRDQ8TDS7 321 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 ZNF581Q9P0T4 197 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 DPM3Q9P2X0 92 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 TPRKBQ9Y3C4 175 aa13.08□□□□□ -0.32
CPSF6-203ENST00000456847 A6NDX4 124 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 CD34P28906 385 aa13.07□□□□□ -0.32
CPSF6-203ENST00000456847 KIR2DS4P43632 304 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms