RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZNF85Q03923 595 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PDZK1IP1Q13113 114 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MADCAM1Q13477 382 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF146Q15072 292 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CDK5R1Q15078 307 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PAN3Q58A45 887 aaKnown RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SPIN3Q5JUX0 258 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C12orf73Q69YU5 71 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q6P435 159 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 UNQ9370/PRO34162Q6UXP9 181 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZBTB49Q6ZSB9 765 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q6ZSR3 168 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM220AQ7Z4H9 259 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SBSPONQ8IVN8 264 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q8IYB0 196 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR51A2Q8NGJ7 313 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR13C3Q8NGS6 347 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR10X1Q8NGY0 326 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR9G1Q8NH87 305 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CHPT1Q8WUD6 406 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FGGYQ96C11 551 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CIB1Q99828 191 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TEX12Q9BXU0 123 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GPR61Q9BZJ8 451 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM192AQ9GZU8 254 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ALX4Q9H161 411 aaPredicted RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RIBC2Q9H4K1 309 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DCLRE1BQ9H816 532 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GNB4Q9HAV0 340 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KRT84Q9NSB2 600 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SCOCQ9UIL1 159 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PSG11Q9UQ72 335 aa4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF256Q9Y2P7 627 aaPredicted RBP4.69□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TRAV24A0A0B4J272 114 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KBTBD11-OT1A0A1B0GTJ5 212 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TRIM64CA6NLI5 447 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZAR1LA6NP61 321 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 J3QR06 171 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 M0QZK8 103 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CCRL2O00421 344 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SH2D1BO14796 132 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KDM4BO94953 1096 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CYB5AP00167 134 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HCKP08631 526 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ANXA8P13928 327 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ERP29P30040 261 aaKnown RBP4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ATP1B3P54709 279 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZP1P60852 638 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GNB1P62873 340 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SRSF7Q16629 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NXNL2Q5VZ03 156 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR52W1Q6IF63 320 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PIGWQ7Z7B1 504 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MOB3BQ86TA1 216 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RTN4RL2Q86UN3 420 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GID4Q8IVV7 300 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FOXRED2Q8IWF2 684 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ENTHD1Q8IYW4 607 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q8N9W7 124 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR5M8Q8NGP6 311 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR2G2Q8NGZ5 317 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR8U1Q8NH10 309 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PP6455Q8WZ26 134 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NSL1Q96IY1 281 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 EAF1Q96JC9 268 aaPredicted RBP4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MCRIP2Q9BUT9 160 aaKnown RBP4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ADI1Q9BV57 179 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 COMMD4Q9H0A8 199 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KLK15Q9H2R5 256 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PALMDQ9NP74 551 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FRRS1LQ9P0K9 344 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AMMECR1Q9Y4X0 333 aaPredicted RBP4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KMT2AQ03164 3969 aa4.68□□□□□ -1.66
HLA-DPA3-207ENST00000454398 A0A087X0M5 115 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IGHV1-3A0A0C4DH29 117 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LCE6AA0A183 80 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 A0A1B0GX30 115 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TCRBV3S1A0A5B6 114 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A18PA6NE21 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A16PA6NEW6 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A20PA6NIJ5 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SAC3D1A6NKF1 404 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AQP12BA6NM10 295 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF729A6NN14 1252 aaPredicted RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A9PA6NNJ1 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A12PA8MX19 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A5PA8MXJ8 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 G3V318 75 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C3orf84H3BNL1 204 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AP4M1O00189 453 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DEGS1O15121 323 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IGHG2P01859 326 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CSN2P05814 226 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FRMD6-AS1P0C7T7 363 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A15PP0C7V4 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A13PP0C7W8 464 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms