RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 IDNKQ5T6J7 187 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 RAB12Q6IQ22 244 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 TRAPPC6BQ86SZ2 158 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 UPRTQ96BW1 309 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 SIRPDQ9H106 197 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 LPAR5Q9H1C0 372 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 UBE2J1Q9Y385 318 aaPredicted RBP12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 LINC00312Q9Y6C7 94 aa12.03□□□□□ -0.48
NCKIPSD-207ENST00000453349 METTL21EPA6NDL7 271 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 PDCD6O75340 191 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 GABARAPO95166 117 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 SRD5A1P18405 259 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 RAB6AP20340 208 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 BLVRBP30043 206 aaPredicted RBP12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 VEGFCP49767 419 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 NCS1P62166 190 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 SCGB2A2Q13296 93 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 SLC35E4Q6ICL7 350 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 SLC16A12Q6ZSM3 486 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 FAM89BQ8N5H3 189 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 OR56B1Q8NGI3 324 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 CORO2AQ92828 525 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 PTX4Q96A99 478 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 COQ2Q96H96 371 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 NICN1Q9BSH3 213 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 NAA50Q9GZZ1 169 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 NCOR1P1Q9H4R4 102 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 METTL8Q9H825 291 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 PLEKHJ1Q9NW61 149 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 RCC2Q9P258 522 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-207ENST00000453349 HIVEP1P15822 2718 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 MEIKINA0A087WXM9 373 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 A0A0B4J203 849 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 ODAMA1E959 279 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 NOL3O60936 208 aaKnown RBP12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 MMP9P14780 707 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 CCL3L1P16619 93 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 SCAND1P57086 179 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF273Q14593 569 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 CTF1Q16619 201 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 NKAPLQ5M9Q1 402 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 RSBN1Q5VWQ0 802 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 SIGIRRQ6IA17 410 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 Q6ZTK2 550 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 USP43Q70EL4 1123 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 Q8N7P7 452 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 PLPPR1Q8TBJ4 325 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 LHX4Q969G2 390 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF714Q96N38 554 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 GAL3ST2Q9H3Q3 398 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 ETAA1Q9NY74 926 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 TAS2R3Q9NYW6 316 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 NUP50Q9UKX7 468 aa12.01□□□□□ -0.49
NCKIPSD-207ENST00000453349 TMEM30CPA0ZSE6 113 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 C17orf98A8MV24 154 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 SOCS1O15524 211 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 CA11O75493 328 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 SNRPBP14678 240 aaKnown RBP12□□□□□ -0.49
NCKIPSD-207ENST00000453349 PRTN3P24158 256 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 TMBIM6P55061 237 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 BPIFB3P59826 476 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 ERVFRD-1P60508 538 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 PAX5Q02548 391 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 GPR157Q5UAW9 335 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 TBX15Q96SF7 602 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 FAAP24Q9BTP7 215 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 HEXA-AS1Q9H8Q6 139 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 ABRACLQ9P1F3 81 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 KIF25Q9UIL4 384 aa12□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF469Q96JG9 3925 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 A0A0A6YYD4 124 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 TRAV40A0A0B4J280 105 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 MEX3AA1L020 520 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF729A6NN14 1252 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 RBP4P02753 201 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 GZMHP20718 246 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 FPR2P25090 351 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 CHATP28329 748 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 RORCP51449 518 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 EFNB2P52799 333 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 GUCA2AQ02747 115 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 NCR3LG1Q68D85 454 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 ZNF497Q6ZNH5 498 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 C6orf201Q7Z4U5 140 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 RAB2BQ8WUD1 216 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 SLC25A46Q96AG3 418 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 PHF21AQ96BD5 680 aa11.99□□□□□ -0.49
NCKIPSD-207ENST00000453349 BCL7BQ9BQE9 202 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms