RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TRBV23-1A0A0A0MS06 115 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 FUOMA2VDF0 154 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 PHF1O43189 567 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-204ENST00000452182 NDUFB7P17568 137 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
SCN9A-204ENST00000452182 Q6ZTK2 550 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 GDPD3Q7L5L3 318 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 GAPTQ8N292 157 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 LINC01356Q8N9X3 169 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 LY6G5BQ8NDX9 201 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 ST8SIA4Q92187 359 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 DACT3Q96B18 629 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-204ENST00000452182 PHF21AQ96BD5 680 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 RAB3CQ96E17 227 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 S100A16Q96FQ6 103 aaKnown RBP9.59□□□□□ -0.87
SCN9A-204ENST00000452182 DCTN5Q9BTE1 182 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 CHST6Q9GZX3 395 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 PPA2Q9H2U2 334 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCN9A-204ENST00000452182 PLEKHJ1Q9NW61 149 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 MALRD1Q5VYJ5 2156 aa9.59□□□□□ -0.87
SCN9A-204ENST00000452182 ABCA2Q9BZC7 2435 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 AVPP01185 164 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 MSMBP08118 114 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 IGHV4-31P0DP07 118 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 FOSL1P15407 271 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 HIST1H1DP16402 221 aaKnown RBP9.58□□□□□ -0.88
SCN9A-204ENST00000452182 P2RX3P56373 397 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 PAX2Q02962 417 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 MEF2CQ06413 473 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-204ENST00000452182 MOGAT2Q3SYC2 334 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 PLAC9Q5JTB6 97 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 SLC35E4Q6ICL7 350 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 METAP1DQ6UB28 335 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-204ENST00000452182 BTN2A1Q7KYR7 527 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 CMTM4Q8IZR5 234 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 FGFRL1Q8N441 504 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 BPIFB2Q8N4F0 458 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 MAPK1IP1LQ8NDC0 245 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 C18orf12Q96KH6 178 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 CITED4Q96RK1 184 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 MMP27Q9H306 513 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 DIABLOQ9NR28 239 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 LPAR3Q9UBY5 353 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 RPUSD1Q9UJJ7 312 aaKnown RBP9.58□□□□□ -0.88
SCN9A-204ENST00000452182 DSCAML1Q8TD84 2053 aa9.58□□□□□ -0.88
SCN9A-204ENST00000452182 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
SCN9A-204ENST00000452182 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 TRAV20A0A0B4J274 112 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 SERPINE3A8MV23 424 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 MFNGO00587 321 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 HSPB6O14558 160 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 XRCC3O43542 346 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 LIPFP07098 398 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 RPL31P62899 125 aaKnown RBP9.57□□□□□ -0.88
SCN9A-204ENST00000452182 LCN2P80188 198 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 ATXN7L3Q14CW9 347 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-204ENST00000452182 NKAPLQ5M9Q1 402 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 RSBN1Q5VWQ0 802 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-204ENST00000452182 C6orf201Q7Z4U5 140 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 MSI2Q96DH6 328 aaKnown RBP9.57□□□□□ -0.88
SCN9A-204ENST00000452182 COQ2Q96H96 371 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 ARHGAP5-AS1Q96IT6 56 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 SULT4A1Q9BR01 284 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 PECRQ9BY49 303 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 KCNK7Q9Y2U2 307 aa9.57□□□□□ -0.88
SCN9A-204ENST00000452182 KIR2DS1A0A191URI9 304 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 C22orf46C9J442 243 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 CTDSP2O14595 271 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 RGS5O15539 181 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ENSAO43768 121 aaKnown RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 HPGDSO60760 199 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 TPPPO94811 219 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 EIF4EP06730 217 aaKnown RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ELK1P19419 428 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 GATA3P23771 443 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 CDK2P24941 298 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 DVL1P1P54792 670 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 EDDM3BP56851 147 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 AESQ08117 197 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 EDDM3AQ14507 147 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 KRBOX4Q5JUW0 171 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 CYB5R2Q6BCY4 276 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF497Q6ZNH5 498 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 PLPPR1Q8TBJ4 325 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 H1FXQ92522 213 aaKnown RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 CORO2AQ92828 525 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 FAAP24Q9BTP7 215 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 C6orf62Q9GZU0 229 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 RIMS4Q9H426 269 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ADAM30Q9UKF2 790 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 A0A1W2PPH5 198 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 hADV38S2A0JD32 116 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms