RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IGFBP3P17936 291 aaPredicted RBP15.59■□□□□ 0.09
USP40-207ENST00000450940 CAPGP40121 348 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 RPS11P62280 158 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP40-207ENST00000450940 ST3GAL4Q11206 333 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 MED21Q13503 144 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 ATXN7L3Q14CW9 347 aaPredicted RBP15.59■□□□□ 0.09
USP40-207ENST00000450940 TMEM219Q86XT9 240 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 KLHDC1Q8N7A1 406 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 NDNFQ8TB73 568 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 IFT22Q9H7X7 185 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 PLCXD1Q9NUJ7 323 aa15.59■□□□□ 0.09
USP40-207ENST00000450940 CHCHD3Q9NX63 227 aaKnown RBP15.59■□□□□ 0.09
USP40-207ENST00000450940 CNOT2Q9NZN8 540 aaKnown RBP15.59■□□□□ 0.09
USP40-207ENST00000450940 KBTBD11-OT1A0A1B0GTJ5 212 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 EFCAB10A6NFE3 127 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 TSPAN15O95858 294 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 GNAO1P09471 354 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 KCNJ3P48549 501 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 SLC34A1Q06495 639 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 RSU1Q15404 277 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 C2orf68Q2NKX9 166 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 PAN3Q58A45 887 aaKnown RBP15.58■□□□□ 0.08
USP40-207ENST00000450940 YIF1BQ5BJH7 314 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 Q6ZTK2 550 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 OR4D6Q8NGJ1 314 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 WIPF2Q8TF74 440 aaPredicted RBP15.58■□□□□ 0.08
USP40-207ENST00000450940 PGLYRP3Q96LB9 341 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 NR1H4Q96RI1 486 aaPredicted RBP15.58■□□□□ 0.08
USP40-207ENST00000450940 ZNF286AQ9HBT8 521 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 FOXJ3Q9UPW0 622 aa15.58■□□□□ 0.08
USP40-207ENST00000450940 LY6LH3BQJ8 138 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 F2RL2O00254 374 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 BDKRB2P30411 391 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 ZNF93P35789 620 aaPredicted RBP15.57■□□□□ 0.08
USP40-207ENST00000450940 OR3A4PP47883 348 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 PPP3R1P63098 170 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 PIGYQ3MUY2 71 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 Q499Y3 187 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 DDI2Q5TDH0 399 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 C8orf59Q8N0T1 100 aaPredicted RBP15.57■□□□□ 0.08
USP40-207ENST00000450940 ZNF565Q8N9K5 539 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 OR13C5Q8NGS8 318 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 OR10K1Q8NGX5 313 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 CREB3L1Q96BA8 519 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 NKX3-1Q99801 234 aaPredicted RBP15.57■□□□□ 0.08
USP40-207ENST00000450940 BARHL1Q9BZE3 327 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 PRSS22Q9GZN4 317 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 PSORS1C1Q9UIG5 152 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 KIF25Q9UIL4 384 aa15.57■□□□□ 0.08
USP40-207ENST00000450940 LEUTXA8MZ59 168 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 CDRT1O95170 752 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 HTR3BO95264 441 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 FSTP19883 344 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 HLA-DRB5Q30154 266 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 RSBN1Q5VWQ0 802 aaPredicted RBP15.56■□□□□ 0.08
USP40-207ENST00000450940 OR13A1Q8NGR1 328 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 ORAI1Q96D31 301 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 KIRREL1Q96J84 757 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 WNT10AQ9GZT5 417 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 FAM192AQ9GZU8 254 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 METTL9Q9H1A3 318 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 PAK1IP1Q9NWT1 392 aaPredicted RBP15.56■□□□□ 0.08
USP40-207ENST00000450940 ING3Q9NXR8 418 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 ST3GAL6Q9Y274 331 aa15.56■□□□□ 0.08
USP40-207ENST00000450940 MEIKINA0A087WXM9 373 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 TRBV5-7A0A0A0MS05 114 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 NPIPB11E5RHQ5 1161 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 BUB1B-PAK6H3BSN5 160 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 H3BUI4 141 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 CD1AP06126 327 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 CSF1P09603 554 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 C21orf33P30042 268 aaPredicted RBP15.55■□□□□ 0.08
USP40-207ENST00000450940 CEACAM3P40198 252 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 PRRX1P54821 245 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 RBM11P57052 281 aaKnown RBP15.55■□□□□ 0.08
USP40-207ENST00000450940 TAS2R43P59537 309 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 BLCAPP62952 87 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 DEFA6Q01524 100 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 RIPK1Q13546 671 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 HABP2Q14520 560 aaPredicted RBP15.55■□□□□ 0.08
USP40-207ENST00000450940 UTF1Q5T230 341 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 C16orf82Q7Z2V1 217 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 LINC00596Q86U02 117 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 OSR2Q8N2R0 312 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 PLPPR1Q8TBJ4 325 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 FKBP14Q9NWM8 211 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 CALYQ9NYX4 217 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 ING4Q9UNL4 249 aa15.55■□□□□ 0.08
USP40-207ENST00000450940 TRAV8-7A0A075B6U6 113 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 FAM172BPA6NC97 362 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 OOSP1A8MZH6 123 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 HSPB6O14558 160 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 TOR1AO14656 332 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 XPNPEP2O43895 674 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 ZNF780AO75290 641 aaPredicted RBP15.54■□□□□ 0.08
USP40-207ENST00000450940 VSIG10L2P0DP72 767 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 BRS3P32247 399 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 ZFP41Q8N8Y5 198 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 SUMF2Q8NBJ7 301 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 OR10A7Q8NGE5 316 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms