RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FUT3P21217 361 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 TAS2R30P59541 319 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 SRPXP78539 464 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 RTP5Q14D33 572 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 PP6455Q8WZ26 134 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 NTNG2Q96CW9 530 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 ATP5SQ99766 215 aa10.83□□□□□ -0.68
UBE3B-204ENST00000449510 MDFIC2A0A1B0GVS7 189 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 LIPT2A6NK58 231 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF32P17041 273 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 GDF1P27539 372 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF90Q03938 601 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 IL13RA2Q14627 380 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 LPAL2Q16609 132 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 GPBAR1Q8TDU6 330 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 PLEKHA3Q9HB20 300 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF581Q9P0T4 197 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 F8VVB4 439 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 F8VWA3 439 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 MRPL33O75394 65 aaKnown RBP10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BDP58876 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BCP62807 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 OR5I1Q13606 314 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST2H2BEQ16778 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-204ENST00000449510 C9orf50Q5SZB4 431 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ASPHD2Q6ICH7 369 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF519Q8TB69 540 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BHQ93079 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF488Q96MN9 340 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BNQ99877 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H2BMQ99879 126 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 WFDC1Q9HC57 220 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 PRSS50Q9UI38 385 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 TRAPPC1Q9Y5R8 145 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 CD33P20138 364 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 EDDM3BP56851 147 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 OR10AD1Q8NGE0 317 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF107Q9UII5 783 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-204ENST00000449510 RIF1Q5UIP0 2472 aaKnown RBP10.82□□□□□ -0.68
UBE3B-204ENST00000449510 SOD3P08294 240 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 HOXA5P20719 270 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 KITLGP21583 273 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 FCARP24071 287 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 SLC35B1P78383 322 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF439Q8NDP4 499 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF721Q8TF20 911 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 TIMM10BQ9Y5J6 103 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 HS3ST3A1Q9Y663 406 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 GAPDHP04406 335 aaKnown RBP10.81□□□□□ -0.68
UBE3B-204ENST00000449510 EN2P19622 333 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-204ENST00000449510 PMCHP20382 165 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 SMAD4Q13485 552 aaKnown RBP10.81□□□□□ -0.68
UBE3B-204ENST00000449510 EDDM3AQ14507 147 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 MRGPRFQ96AM1 343 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 MISP3Q96FF7 219 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 PISDQ9UG56 409 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 CACNA1BQ00975 2339 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 ANKUB1A6NFN9 424 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF732B4DXR9 585 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 SCTP09683 121 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 DCDP81605 110 aaKnown RBP10.81□□□□□ -0.68
UBE3B-204ENST00000449510 DPPA3Q6W0C5 159 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 CXorf67Q86X51 503 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-204ENST00000449510 DMBX1Q8NFW5 382 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 CPT1CQ8TCG5 803 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 RPH3ALQ9UNE2 315 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
UBE3B-204ENST00000449510 CBY3A6NI87 242 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 ANKRD30BLA7E2S9 258 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 C3orf80F5H4A9 247 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 CD5P06127 495 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 THBS4P35443 961 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 CTAG1AP78358 180 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF468Q5VIY5 522 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-204ENST00000449510 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 HEYLQ9NQ87 328 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-204ENST00000449510 ENDOGQ14249 297 aaKnown RBP10.8□□□□□ -0.68
UBE3B-204ENST00000449510 ZNF124Q15973 351 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 GAB4Q2WGN9 574 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 SNAI3Q3KNW1 292 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 SYT13Q7L8C5 426 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 PTX4Q96A99 478 aa10.8□□□□□ -0.68
UBE3B-204ENST00000449510 GPR27Q9NS67 375 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms