RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 EXTL1Q92935 676 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 MOB3AQ96BX8 217 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 SLC7A10Q9NS82 523 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 HSD17B6O14756 317 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 MPPED1O15442 326 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 TNFSF12O43508 249 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 NKX2-1P43699 371 aaPredicted RBP11.14□□□□□ -0.63
SHC1-210ENST00000448116 RBM11P57052 281 aaKnown RBP11.14□□□□□ -0.63
SHC1-210ENST00000448116 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHC1-210ENST00000448116 IL13RA2Q14627 380 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 HMGN3Q15651 99 aa11.14□□□□□ -0.63
SHC1-210ENST00000448116 PQLC2LA1A4F0 135 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 IFNA4P05014 189 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 GDF1P27539 372 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 DEFA6Q01524 100 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 CXorf66Q5JRM2 361 aaPredicted RBP11.13□□□□□ -0.63
SHC1-210ENST00000448116 Q6ZPA2 131 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 OR2C3Q8N628 320 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 OR2Y1Q8NGV0 311 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 GINS3Q9BRX5 216 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 PBDC1Q9BVG4 233 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 GLRX2Q9NS18 164 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 KNTC1P50748 2209 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 ZNF816-ZNF321PA0A0X1KG74 233 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 OR6C6A6NF89 314 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 MT-ND4LP03901 98 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 HOXC12P31275 282 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 TBC1D26Q86UD7 250 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 M1APQ8TC57 530 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 SF3B5Q9BWJ5 86 aaKnown RBP11.13□□□□□ -0.63
SHC1-210ENST00000448116 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 ADAMTS20P59510 1910 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
SHC1-210ENST00000448116 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 TXNL1O43396 289 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SCTP09683 121 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 CCL20P78556 96 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 HAGHQ16775 308 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 Q6ZSR3 168 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 GPR35Q9HC97 309 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 IL36RNQ9UBH0 155 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ZNF716A6NP11 495 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 WRBO00258 174 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ADAM20O43506 726 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 NQO2P16083 231 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 BCL3P20749 454 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SRD5A2P31213 254 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 HOXA6P31267 233 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 CLDN15P56746 228 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 TSC22D1Q15714 1073 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 PRR18Q8N4B5 295 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SUMF2Q8NBJ7 301 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 OR2V1Q8NHB1 315 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SLC35B3Q9H1N7 401 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ZDBF2Q9HCK1 2354 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 TCAPO15273 167 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 TK1P04183 234 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 EPHA1P21709 976 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ATP6V0CP27449 155 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 SULT1A1P50225 295 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 GPM6AP51674 278 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 B3GALT5-AS1P59052 145 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 PCBD1P61457 104 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ZNF561Q8N587 486 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
SHC1-210ENST00000448116 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 ARV1Q9H2C2 271 aa11.12□□□□□ -0.63
SHC1-210ENST00000448116 IGSF23A1L1A6 192 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 P4HA3Q7Z4N8 544 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 GGNQ86UU5 652 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 GAPTQ8N292 157 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 HLA-HP01893 362 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 CD46P15529 392 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 SPCS3P61009 180 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 TMEM42Q69YG0 159 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 TMEM211Q6ICI0 200 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 FAM180AQ6UWF9 173 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 OR5C1Q8NGR4 320 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 BOD1Q96IK1 185 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 SGCZQ96LD1 299 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
SHC1-210ENST00000448116 H3BP45 60 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 RAB5AP20339 215 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 RUNX1Q01196 453 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
SHC1-210ENST00000448116 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
SHC1-210ENST00000448116 FREM2Q5SZK8 3169 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 C5orf49A4QMS7 147 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 TRDCB7Z8K6 153 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms