RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 HTR1DP28221 377 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 OR3A4PP47883 348 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 KRTAP10-3P60369 221 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 BDH1Q02338 343 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 SRSF4Q08170 494 aaKnown RBP15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 LINC00596Q86U02 117 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 CDH26Q8IXH8 852 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 ABHD12Q8N2K0 398 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 NANOGP1Q8N7R0 232 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 OR13C5Q8NGS8 318 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 ZNF596Q8TC21 504 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 S100A13Q99584 98 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 NKX1-2Q9UD57 310 aaPredicted RBP15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 PKD1L1Q8TDX9 2849 aa15.21■□□□□ 0.03
ATPAF2-201ENST00000444058 TRBV5-7A0A0A0MS05 114 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 CDRT1O95170 752 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 HTR3BO95264 441 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 CSTBP04080 98 aaKnown RBP15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 CGB3P0DN86 165 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 CGB7P0DN87 165 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 GPR176Q14439 515 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 ATXN7L3Q14CW9 347 aaPredicted RBP15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 FAM189A2Q15884 450 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 PAN3Q58A45 887 aaKnown RBP15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 TREML4Q6UXN2 200 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 OSR2Q8N2R0 312 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 ZFP41Q8N8Y5 198 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 OR4D6Q8NGJ1 314 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 OR4P4Q8NGL7 312 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 CREB3L1Q96BA8 519 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 NR1H4Q96RI1 486 aaPredicted RBP15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 ZNF184Q99676 751 aaPredicted RBP15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 LINC00574Q9H8X3 128 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 FOXJ3Q9UPW0 622 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 ST3GAL6Q9Y274 331 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 TRRAPQ9Y4A5 3859 aa15.2■□□□□ 0.02
ATPAF2-201ENST00000444058 KBTBD11-OT1A0A1B0GTJ5 212 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 M0QZ24 198 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 CHST1O43916 411 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 IGLV1-47P01700 117 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 CELP19835 753 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 RBM11P57052 281 aaKnown RBP15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 GABPB1Q06547 395 aaPredicted RBP15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 PIGYQ3MUY2 71 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 PRAMEF5Q5TYX0 476 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 OR10K1Q8NGX5 313 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 OR2T6Q8NHC8 308 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 ORAI1Q96D31 301 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 OR14A2Q96R54 314 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 PPIL3Q9H2H8 161 aaKnown RBP15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 DPM3Q9P2X0 92 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 ING4Q9UNL4 249 aa15.19■□□□□ 0.02
ATPAF2-201ENST00000444058 TRAV8-7A0A075B6U6 113 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MEGF11A6BM72 1044 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 A6NDX4 124 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 H3BUI4 141 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 CDK1P06493 297 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 GTF2F2P13984 249 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MAPK3P27361 379 aaPredicted RBP15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 EFNB2P52799 333 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 C17orf58Q2M2W7 97 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MPV17LQ2QL34 196 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 C6orf141Q5SZD1 244 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 RSBN1Q5VWQ0 802 aaPredicted RBP15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 NDNFQ8TB73 568 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 NRG4Q8WWG1 115 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MYDGFQ969H8 173 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MRPS24Q96EL2 167 aaKnown RBP15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 DERL3Q96Q80 235 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MND1Q9BWT6 205 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 TCF7L1Q9HCS4 588 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 KIF25Q9UIL4 384 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 HILPDAQ9Y5L2 63 aa15.18■□□□□ 0.02
ATPAF2-201ENST00000444058 MEIKINA0A087WXM9 373 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 FAM90A22PA8MWA6 464 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 LEUTXA8MZ59 168 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 RAB13P51153 203 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 PRRX1P54821 245 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 DOC2BQ14184 412 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 CCBE1Q6UXH8 406 aaPredicted RBP15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 Q8N2B8 174 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 MS4A15Q8N5U1 240 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 OR10A7Q8NGE5 316 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 DPCDQ9BVM2 203 aaPredicted RBP15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 SCN3BQ9NY72 215 aa15.17■□□□□ 0.02
ATPAF2-201ENST00000444058 KIAA2026Q5HYC2 2103 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 MAGEA13PA6NCF6 341 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 NPIPB11E5RHQ5 1161 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 F2RL2O00254 374 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 HSPB6O14558 160 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 TOR1AO14656 332 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 OR7C1O76099 320 aaPredicted RBP15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 GDNFP39905 211 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 CEACAM3P40198 252 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 ARHGDIBP52566 201 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 AQP4P55087 323 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 HLA-DRB5Q30154 266 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 PLA1AQ53H76 456 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 NKAIN3Q8N8D7 197 aa15.16■□□□□ 0.02
ATPAF2-201ENST00000444058 SUMF2Q8NBJ7 301 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms