RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 FBXW9Q5XUX1 488 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 DHRS11Q6UWP2 260 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 FAM57BQ71RH2 274 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 TMED4Q7Z7H5 227 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 MYPOPQ86VE0 399 aaPredicted RBP4.07□□□□□ -1.76
EDEM3-203ENST00000439962 RNF141Q8WVD5 230 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 GPER1Q99527 375 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 CCL19Q99731 98 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SUCNR1Q9BXA5 334 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM38BQ9NVV0 291 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 TREM2Q9NZC2 230 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 TIMM10BQ9Y5J6 103 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 IGKV1-9A0A0C4DH69 117 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 LOC105371267A0A1B0GV96 52 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF503-AS2A6NEH8 195 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ZSCAN5BA6NJL1 495 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF587BE7ETH6 402 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SGCEO43556 437 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 LMX1BO60663 402 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 CRTAPO75718 401 aaPredicted RBP4.07□□□□□ -1.76
EDEM3-203ENST00000439962 DIRAS3O95661 229 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 MPIG6BO95866 241 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 IL18BPO95998 194 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SERPINA5P05154 406 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SOD3P08294 240 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 GNB3P16520 340 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 OR3A4PP47883 348 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 FUT6P51993 359 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 UBE2NP61088 152 aaKnown RBP4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ARF1P84077 181 aaKnown RBP4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SGCAQ16586 387 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 NKPD1Q17RQ9 610 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 NKAPLQ5M9Q1 402 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ELP2Q6IA86 826 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 CRIP3Q6Q6R5 217 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 Q6ZT83 130 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 KCTD9Q7L273 389 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SPAG16Q8N0X2 631 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ZIC4Q8N9L1 334 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 POC1AQ8NBT0 407 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 OR51T1Q8NGJ9 327 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 OR1F12Q8NHA8 337 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 NUDCD2Q8WVJ2 157 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 MARC2Q969Z3 335 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 LYZL4Q96KX0 146 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 C5orf66Q9H5L9 145 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 PLSCR4Q9NRQ2 329 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 NECAP2Q9NVZ3 263 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 PARPBPQ9NWS1 579 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 CISD1Q9NZ45 108 aaKnown RBP4.07□□□□□ -1.76
EDEM3-203ENST00000439962 DUSP13Q9UII6 198 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 SPEF1Q9Y4P9 236 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 ATP23Q9Y6H3 246 aa4.07□□□□□ -1.76
EDEM3-203ENST00000439962 DPRXA6NFQ7 191 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF724A8MTY0 619 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 DEFB108AA8MXU0 73 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RER1O15258 196 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 IFNA2P01563 188 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RPS2P15880 293 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ATP1B3P54709 279 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 BLOC1S1P78537 153 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ARFRP1Q13795 201 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RBM39Q14498 530 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RSU1Q15404 277 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 HMGN3Q15651 99 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CHRFAM7AQ494W8 412 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 AADACL3Q5VUY0 350 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 COMMD2Q86X83 199 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SGPP2Q8IWX5 399 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 BAP18Q8IXM2 172 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CIARTQ8N365 385 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CCDC71LQ8N9Z2 235 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ARL11Q969Q4 196 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM230Q96A57 120 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SPOCK3Q9BQ16 436 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RTBDNQ9BSG5 229 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RIMS4Q9H426 269 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 KCNK15Q9H427 330 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 PLK3Q9H4B4 646 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SMDT1Q9H4I9 107 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 GSX1Q9H4S2 264 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 BCO1Q9HAY6 547 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 MMP26Q9NRE1 261 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CARHSP1Q9Y2V2 147 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ARFGEF3Q5TH69 2177 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 NBEAL1Q6ZS30 2694 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 TRBV6-6A0A0A6YYG2 114 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 LRP5LA4QPB2 252 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 MEIS3P1A6NDR6 274 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CRYM-AS1A6NIL9 109 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SOCS1O15524 211 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 FARS2O95363 451 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SIX6O95475 246 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 IFNA21P01568 189 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CSTBP04080 98 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RLN2P04090 185 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CD3EP07766 207 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 H2AFB1P0C5Y9 115 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms