RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 NICN1Q9BSH3 213 aa12.18□□□□□ -0.46
SKA2-202ENST00000437036 RBM38Q9H0Z9 239 aaKnown RBP12.18□□□□□ -0.46
SKA2-202ENST00000437036 RHBDL2Q9NX52 303 aa12.18□□□□□ -0.46
SKA2-202ENST00000437036 TMEM30CPA0ZSE6 113 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 DPPA5A6NC42 116 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 J3QLI3 93 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 SOCS1O15524 211 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 CA11O75493 328 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 LY6G6DO95868 133 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 CHATP28329 748 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 EFNB2P52799 333 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 AESQ08117 197 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 ARL6IP1Q15041 203 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 FAHD2BQ6P2I3 314 aaPredicted RBP12.17□□□□□ -0.46
SKA2-202ENST00000437036 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 METAP1DQ6UB28 335 aaPredicted RBP12.17□□□□□ -0.46
SKA2-202ENST00000437036 Q6ZTK2 550 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 LY6G5BQ8NDX9 201 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 OR5H6Q8NGV6 325 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 OR10R2Q8NGX6 335 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 FAHD2AQ96GK7 314 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 MMP26Q9NRE1 261 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 YAE1D1Q9NRH1 226 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 ING3Q9NXR8 418 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 ETAA1Q9NY74 926 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
SKA2-202ENST00000437036 ZNF581Q9P0T4 197 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 COMMD3Q9UBI1 195 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 INSIG2Q9Y5U4 225 aa12.17□□□□□ -0.46
SKA2-202ENST00000437036 ABCA1O95477 2261 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 ACANP16112 2415 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 TRGV10A0A0A0MS01 117 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 hCG_1809904A0A1W2PP81 198 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 A0A1W2PPE2 198 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 A0A1W2PR64 198 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 A0A1W2PRV1 198 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 ODAMA1E959 279 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 UBE2QL1A1L167 161 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 A8MV72 311 aaPredicted RBP12.16□□□□□ -0.46
SKA2-202ENST00000437036 PAX5Q02548 391 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 PAX2Q02962 417 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 UBE2NLQ5JXB2 153 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 METTL11BQ5VVY1 283 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 SLC35E4Q6ICL7 350 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 TRAPPC6BQ86SZ2 158 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 SAMD12Q8N8I0 201 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 RAB3CQ96E17 227 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 S100A16Q96FQ6 103 aaKnown RBP12.16□□□□□ -0.46
SKA2-202ENST00000437036 CMTM3Q96MX0 182 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 NCOR1P1Q9H4R4 102 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 C7orf69Q9H7B7 122 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 DIABLOQ9NR28 239 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 C19orf12Q9NSK7 152 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 ONECUT1Q9UBC0 465 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 HSF4Q9ULV5 492 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
SKA2-202ENST00000437036 DOCK11Q5JSL3 2073 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 MEIKINA0A087WXM9 373 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 A0A0A6YYH2 397 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 A6NJ64 397 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 GLIPR1P48060 266 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 MRPS15P82914 257 aaKnown RBP12.15□□□□□ -0.46
SKA2-202ENST00000437036 PAX8Q06710 450 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 C6orf201Q7Z4U5 140 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 KIR3DL3Q8N743 410 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 TPRX1Q8N7U7 411 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 SMR3AQ99954 134 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 FAAP24Q9BTP7 215 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 BATF3Q9NR55 127 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 KIF25Q9UIL4 384 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 UBE2J1Q9Y385 318 aaPredicted RBP12.15□□□□□ -0.46
SKA2-202ENST00000437036 KPTNQ9Y664 436 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 AUP1Q9Y679 476 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
SKA2-202ENST00000437036 HIVEP1P15822 2718 aa12.15□□□□□ -0.47
SKA2-202ENST00000437036 YLPM1P49750 1951 aaKnown RBP12.14□□□□□ -0.47
SKA2-202ENST00000437036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.476e-8■■■□□ 16
SKA2-202ENST00000437036 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
SKA2-202ENST00000437036 M0R1W7 72 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 RAB27BO00194 218 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 HNF1AP20823 631 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 TMEM50BP56557 158 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 ARF6P62330 175 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 RSBN1Q5VWQ0 802 aaPredicted RBP12.14□□□□□ -0.47
SKA2-202ENST00000437036 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 PLPPR1Q8TBJ4 325 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 DACT3Q96B18 629 aaPredicted RBP12.14□□□□□ -0.47
SKA2-202ENST00000437036 SLC25A38Q96DW6 304 aa12.14□□□□□ -0.47
SKA2-202ENST00000437036 COQ2Q96H96 371 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms