RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MAD2L1BPQ15013 274 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 TNXAQ16473 311 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PSG3Q16557 428 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 FBXL19-AS1Q494R0 122 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 FAM27D1Q5T7N8 215 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 CLEC18BQ6UXF7 455 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 UNQ9165/PRO28630Q6UXU0 137 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 SHISA6Q6ZSJ9 500 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 CA13Q8N1Q1 262 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR5T1Q8NG75 326 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR2M7Q8NG81 312 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR6N2Q8NGY6 317 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 CDS1Q92903 461 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 STARD4Q96DR4 205 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 DOK1Q99704 481 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 NAPGQ99747 312 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 SIKE1Q9BRV8 207 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 TIMM29Q9BSF4 260 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 TRIM4Q9C037 500 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 STMN4Q9H169 189 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PSTPIP2Q9H939 334 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 ANKHQ9HCJ1 492 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 DDIT4Q9NX09 232 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PPIL1Q9Y3C6 166 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 CBY1Q9Y3M2 126 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 LRRC42Q9Y546 428 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PTPRQQ9UMZ3 2332 aa1.78□□□□□ -2.13
HMGB1P27-201ENST00000431429 CELSR3Q9NYQ7 3312 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV2-28A0A075B6P5 120 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGHV3-49A0A0A0MS15 119 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TRAV8-4A0A0B4J246 113 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 LOC100506127A0A0U1RQW1 187 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TVP23AA6NH52 213 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF850A8MQ14 1090 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 A8MUU9 505 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF879B4DU55 563 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 M0R1X1 148 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 YKT6O15498 198 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SC5DO75845 299 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 PTTG1O95997 202 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 LHBP01229 141 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV2D-28P01615 120 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CD8AP01732 235 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 P01737 135 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 HLA-DQB1P01920 261 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV3-11P04433 115 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 APODP05090 189 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 RHOCP08134 193 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 MMP7P09237 267 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCDC172P0C7W6 258 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 LCN1P31025 176 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 PMELP40967 661 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ERFP50548 548 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ARPP19P56211 112 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 IFFO1Q0D2I5 559 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMED1Q13445 227 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 EIF4EBP2Q13542 120 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ALX1Q15699 326 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 Q3ZCU0 254 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 YIF1BQ5BJH7 314 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ACTL10Q5JWF8 245 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 C6orf183Q5T699 404 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 HES3Q5TGS1 186 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 AP1ARQ63HQ0 302 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 FAHD1Q6P587 224 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF880Q6PDB4 577 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 MDP1Q86V88 176 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SLC25A29Q8N8R3 303 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPERTQ8NA61 448 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SYNPRQ8TBG9 265 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 DEDD2Q8WXF8 326 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CPNE4Q96A23 557 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TCEAL4Q96EI5 215 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPACA5Q96QH8 159 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TBL1YQ9BQ87 522 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 NUDT9Q9BW91 350 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZSCAN16Q9H4T2 348 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 AGPAT3Q9NRZ7 376 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CA10Q9NS85 328 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMEM100Q9NV29 134 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 VAPAQ9P0L0 249 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CLEC2DQ9UHP7 191 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF229Q9UJW7 825 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 SLC7A11Q9UPY5 501 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 CFL2Q9Y281 166 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 WIF1Q9Y5W5 379 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 FBN2P35556 2912 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 MYH13Q9UKX3 1938 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 ABCA2Q9BZC7 2435 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 C2CD3Q4AC94 2353 aa1.77□□□□□ -2.13
HMGB1P27-201ENST00000431429 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 PTPRSQ13332 1948 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 NID2Q14112 1375 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 TICRRQ7Z2Z1 1910 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 NLRC5Q86WI3 1866 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 RELNP78509 3460 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 AKAP13Q12802 2813 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 TRAV8-7A0A075B6U6 113 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms