RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GPR61Q9BZJ8 451 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 OR2D2Q9H210 308 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 PLCXD1Q9NUJ7 323 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 NAGKQ9UJ70 344 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 OOEPA6NGQ2 149 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 ST8SIA3O43173 380 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TSPAN2O60636 221 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 SRSF1Q07955 248 aaKnown RBP eCLIP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 APOOLQ6UXV4 268 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 PNKDQ8N490 385 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 DUSP18Q8NEJ0 188 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 OR8G5Q8NG78 346 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 SNX22Q96L94 193 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TNFRSF12AQ9NP84 129 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 SLC25A37Q9NYZ2 338 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 FOXJ3Q9UPW0 622 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 IGLV3-12A0A075B6K2 115 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TXNDC12O95881 172 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 RRASP10301 218 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 MC5RP33032 325 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 NUTF2P61970 127 aaKnown RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 GAMTQ14353 236 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 OR1S2Q8NGQ3 325 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 DUS3LQ96G46 650 aaKnown RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 MARS2Q96GW9 593 aaKnown RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 CITED4Q96RK1 184 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 FUNDC2Q9BWH2 189 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 C20orf27Q9GZN8 174 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 HSPB11Q9Y547 144 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 LOC390937A0A1W2PQ73 354 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TCRBV3S1A0A5B6 114 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TCRBV4S1A1TA0A5B7 111 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 PRAF2O60831 178 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 IL18BPO95998 194 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 UMODP07911 640 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 FOSL1P15407 271 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 RAE1P78406 368 aaKnown RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TIGITQ495A1 244 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 RNFT1Q5M7Z0 435 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TMEM268Q5VZI3 342 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 LILRB1Q8NHL6 650 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 KLF14Q8TD94 323 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 RAX2Q96IS3 184 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 NUBP2Q9Y5Y2 271 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 HLA-DOBP13765 273 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 ACKR3P25106 362 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CA5AP35218 305 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 SRSF6Q13247 344 aaKnown RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 RBMS2Q15434 407 aaKnown RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 SLC35E3Q7Z769 313 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 ZAR1Q86SH2 424 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 NUDCD2Q8WVJ2 157 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 Q96MF0 132 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 BBC3Q96PG8 261 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 POFUT1Q9H488 388 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CNTD2Q9H8S5 307 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 C20orf141Q9NUB4 165 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 FBXL17Q9UF56 701 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 VSIG4Q9Y279 399 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 MKI67P46013 3256 aaKnown RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 RNASEK-C17orf49H0YIS7 233 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 LYRM1O43325 122 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 KCNAB3O43448 404 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CA11O75493 328 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 OR2F2O95006 317 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 APELAP0DMC3 54 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 GCAP28676 217 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 LYZP61626 148 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 PSG4Q00888 419 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 OR2F1Q13607 317 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 TEX30Q5JUR7 227 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 ELP2Q6IA86 826 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 SKA3Q8IX90 412 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 MINDY2Q8NBR6 621 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 PCNPQ8WW12 178 aaKnown RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 STARD4Q96DR4 205 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 MALSU1Q96EH3 234 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 MYLKQ15746 1914 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 A0A1B0GTL3 188 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 HMX2A2RU54 273 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 GPR31O00270 319 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CD33P20138 364 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 HTR2AP28223 471 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 MPV17P39210 176 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 HTR2BP41595 481 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 VDAC2P45880 294 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 AKR1D1P51857 326 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 ZNF266Q14584 549 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 OR2T35Q8NGX2 323 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 DUX5Q96PT3 197 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 DPCDQ9BVM2 203 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-206ENST00000428680 TAF9BQ9HBM6 251 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 PTTG2Q9NZH5 202 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 CACNG2Q9Y698 323 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 LOC102723996A0A087X1L8 192 aa6.26□□□□□ -1.41
CNOT4-206ENST00000428680 SEMG1P04279 462 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms