RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 BRS3P32247 399 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 GTF2A1P52655 376 aaPredicted RBP12.34□□□□□ -0.43
SEC13-210ENST00000428626 LOXL3P58215 753 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 RBM39Q14498 530 aaKnown RBP12.34□□□□□ -0.43
SEC13-210ENST00000428626 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 CENPVQ7Z7K6 275 aaPredicted RBP12.34□□□□□ -0.43
SEC13-210ENST00000428626 OR4D6Q8NGJ1 314 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 OR10K1Q8NGX5 313 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 PLPPR1Q8TBJ4 325 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
SEC13-210ENST00000428626 RHOFQ9HBH0 211 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 ORC6Q9Y5N6 252 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 GMPPBQ9Y5P6 360 aa12.34□□□□□ -0.43
SEC13-210ENST00000428626 TRAV39A0A0B4J263 110 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 LIMS3P0CW19 117 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 LIMS4P0CW20 117 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 NFYBP25208 207 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 GLP1RP43220 463 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 PIGYQ3MUY2 71 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 RSBN1Q5VWQ0 802 aaPredicted RBP12.33□□□□□ -0.44
SEC13-210ENST00000428626 ELP2Q6IA86 826 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 SERPINA12Q8IW75 414 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 OR52I1Q8NGK6 324 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 OR5AK2Q8NH90 309 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 CNIH3Q8TBE1 160 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 CALYQ9NYX4 217 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 PCDHGB5Q9Y5G0 923 aa12.33□□□□□ -0.44
SEC13-210ENST00000428626 A0A1W2PPI3 338 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 TMEM212A6NML5 194 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 TOR1AO14656 332 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 CD33P20138 364 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 SOX2P48431 317 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 MTNR1BP49286 362 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
SEC13-210ENST00000428626 Q8NFD4 153 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 PXT1Q8NFP0 134 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 OR9G1Q8NH87 305 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 AKR1E2Q96JD6 320 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 INPP5EQ9NRR6 644 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 TAS2R4Q9NYW5 299 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 DHDHQ9UQ10 334 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
SEC13-210ENST00000428626 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
SEC13-210ENST00000428626 MEIKINA0A087WXM9 373 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 NPIPB11E5RHQ5 1161 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 J3QR06 171 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 K7EIL1 84 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 FADS2O95864 444 aaKnown RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 SNRNP70P08621 437 aaKnown RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 PF4V1P10720 104 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 SSTR5P35346 364 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 CEACAM3P40198 252 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 PRRX1P54821 245 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 KRTAP10-11P60412 298 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 LTC4SQ16873 150 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 TNFAIP8L1Q8WVP5 186 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 TSEN15Q8WW01 171 aaKnown RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 CAPSLQ8WWF8 208 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 ORAI1Q96D31 301 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 MRPS18AQ9NVS2 196 aaKnown RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 PSG11Q9UQ72 335 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 SIRT4Q9Y6E7 314 aaPredicted RBP12.31□□□□□ -0.44
SEC13-210ENST00000428626 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
SEC13-210ENST00000428626 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
SEC13-210ENST00000428626 CDRT1O95170 752 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 MPIG6BO95866 241 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 IL1AP01583 271 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 RAB3AP20336 220 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 RAB40BQ12829 278 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 FAM53AQ6NSI3 398 aaPredicted RBP12.3□□□□□ -0.44
SEC13-210ENST00000428626 ZFP1Q6P2D0 407 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 SATL1Q86VE3 508 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 OSR2Q8N2R0 312 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 DRAM1Q8N682 238 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 TOMM40LQ969M1 308 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 FAM118AQ9NWS6 357 aa12.3□□□□□ -0.44
SEC13-210ENST00000428626 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms