RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CNIH1O95406 144 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 GASTP01350 101 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 SMIM11AP58511 58 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 CDC42P60953 191 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 GTSCR1Q86UQ5 136 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 DEFB125Q8N687 156 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 OTULINQ96BN8 352 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 TLCD1Q96CP7 247 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 LRGUKQ96M69 825 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 BTBD10Q9BSF8 475 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 OR51V1Q9H2C8 321 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 ZCCHC4Q9H5U6 513 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 CCDC134Q9H6E4 229 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 GID8Q9NWU2 228 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 OR6C3Q9NZP0 311 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 MRPS28Q9Y2Q9 187 aaKnown RBP9□□□□□ -0.97
DDX39B-208ENST00000428098 KLK5Q9Y337 293 aaPredicted RBP9□□□□□ -0.97
DDX39B-208ENST00000428098 FBXO7Q9Y3I1 522 aa9□□□□□ -0.97
DDX39B-208ENST00000428098 A0A0J9YWU9 116 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 FUOMA2VDF0 154 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 PRKACAP17612 351 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 CD1BP29016 333 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 HTR1FP30939 366 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 IFNGR2P38484 337 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 C19orf54Q5BKX5 351 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 KRBOX4Q5JUW0 171 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 RPL13AP3Q6NVV1 102 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 Q6ZSR3 168 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 RASSF6Q6ZTQ3 369 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 OR9Q2Q8NGE9 314 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 OR10X1Q8NGY0 326 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 RP9Q8TA86 221 aaKnown RBP8.99□□□□□ -0.97
DDX39B-208ENST00000428098 FLYWCH2Q96CP2 140 aaKnown RBP8.99□□□□□ -0.97
DDX39B-208ENST00000428098 RITA1Q96K30 269 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 WFDC10AQ9H1F0 79 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 ARMC1Q9NVT9 282 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 CALYQ9NYX4 217 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
DDX39B-208ENST00000428098 NUFIP1Q9UHK0 495 aaKnown RBP8.99□□□□□ -0.97
DDX39B-208ENST00000428098 IGHV7-81A0A0B4J1V7 117 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 TRBV2A0A0J9YWF9 115 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 NPIPB11E5RHQ5 1161 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 SH2D1BO14796 132 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 SRSF10O75494 262 aaKnown RBP8.98□□□□□ -0.97
DDX39B-208ENST00000428098 SEMG1P04279 462 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 CD7P09564 240 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 VHLP40337 213 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
DDX39B-208ENST00000428098 SCN1BQ07699 218 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 RAB40BQ12829 278 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 METTL21CQ5VZV1 264 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 WDR93Q6P2C0 686 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 Q6P435 159 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 OR8H1Q8NGG4 311 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 RGP1Q92546 391 aaPredicted RBP8.98□□□□□ -0.97
DDX39B-208ENST00000428098 RHOVQ96L33 236 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 HMG20AQ9NP66 347 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 CMC2Q9NRP2 79 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 GSTK1Q9Y2Q3 226 aa8.98□□□□□ -0.97
DDX39B-208ENST00000428098 RIIAD1A6NNX1 92 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 BBIP1A8MTZ0 92 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 SOX14O95416 240 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 IFNGP01579 166 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 BLVRBP30043 206 aaPredicted RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 RRM2P31350 389 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 FUT6P51993 359 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 ATXN7L3Q14CW9 347 aaPredicted RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 SPIN3Q5JUX0 258 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 SAMD4BQ5PRF9 694 aaKnown RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 DEGS2Q6QHC5 323 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 OR2T33Q8NG76 320 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 RTN4IP1Q8WWV3 396 aaPredicted RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 EXOSC4Q9NPD3 245 aaKnown RBP8.97□□□□□ -0.97
DDX39B-208ENST00000428098 PARP11Q9NR21 331 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 BAIAP2Q9UQB8 552 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 V9GYQ6 96 aa8.97□□□□□ -0.97
DDX39B-208ENST00000428098 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 IGKV1-12A0A0C4DH73 117 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 ZNF785A8K8V0 405 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 SLC33A1O00400 549 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-208ENST00000428098 MAGEB4O15481 346 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-208ENST00000428098 IL1AP01583 271 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 IGKV1D-12P01611 117 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 CSN2P05814 226 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 CSN3P07498 182 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 ZNF3P17036 446 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 CD81P60033 236 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 SF3A3Q12874 501 aaKnown RBP eCLIP8.96□□□□□ -0.988e-18■■□□□ 13.5
DDX39B-208ENST00000428098 BNIP1Q12981 228 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 LINC00336Q6ZUF6 198 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 Q8IYB0 196 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 ELMOD2Q8IZ81 293 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 IQCF1Q8N6M8 205 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 ZNF565Q8N9K5 539 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 RCN3Q96D15 328 aa8.96□□□□□ -0.98
DDX39B-208ENST00000428098 SPACA5Q96QH8 159 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms