RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 HEXA-AS1Q9H8Q6 139 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 ASCL3Q9NQ33 180 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 LYG2Q86SG7 212 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CCDC71LQ8N9Z2 235 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 SCGB1C1Q8TD33 95 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 RNF128Q8TEB7 428 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 S1PR3Q99500 378 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 OPA3Q9H6K4 179 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CHCHD2Q9Y6H1 151 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 A0A0G2JK05 382 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 ZFP62Q8NB50 900 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 TMEM229BQ8NBD8 167 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 HPSE2Q8WWQ2 592 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 RPEQ96AT9 228 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 OR5B12Q96R08 314 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 RSPO3Q9BXY4 272 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 IGLV3-12A0A075B6K2 115 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CEBPZOSA8MTT3 80 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CDIPTO14735 213 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 VSIG10L2P0DP72 767 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CDKN1AP38936 164 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 RPS16P62249 146 aaKnown RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 PRDX4Q13162 271 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF658BQ4V348 819 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 BMPERQ8N8U9 685 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 RNASE6Q93091 150 aaKnown RBP9.28□□□□□ -0.92
TCOF1-204ENST00000427724 KIRREL1Q96J84 757 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 GNB4Q9HAV0 340 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 A8MXK9 166 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 CDC20BQ86Y33 519 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 ST3GAL6Q9Y274 331 aa9.28□□□□□ -0.92
TCOF1-204ENST00000427724 TGFAP01135 160 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 MT-ND4LP03901 98 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 H2BFSP57053 126 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 EFNB1P98172 346 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TERB2Q8NHR7 220 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 ZNRF4Q8WWF5 429 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 AMELYQ99218 206 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SOSTQ9BQB4 213 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 PIMREGQ9BSJ6 248 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 MMP26Q9NRE1 261 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM38BQ9NVV0 291 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TGFBR3LH3BV60 316 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM127O75204 238 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SCAF4O95104 1147 aaKnown RBP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 CRHP06850 196 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SSTP61278 116 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 NAAAQ02083 359 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 ACSF3Q4G176 576 aaPredicted RBP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 OR2B11Q5JQS5 317 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 C9orf106Q8NAJ2 232 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SGK3Q96BR1 496 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 MRPL22Q9NWU5 206 aaKnown RBP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TICRRQ7Z2Z1 1910 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 COL6A3P12111 3177 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 NEURL1O76050 574 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 IFNA5P01569 189 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 FABP4P15090 132 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 FPR2P25090 351 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 GNG10P50151 68 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 MFGE8Q08431 387 aaPredicted RBP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM255AQ5JRV8 349 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SP5Q6BEB4 398 aaPredicted RBP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 SHISA5Q8N114 240 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 FRZBQ92765 325 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.93
TCOF1-204ENST00000427724 RNF150Q9ULK6 438 aa9.27□□□□□ -0.93
TCOF1-204ENST00000427724 IGKV3D-11A0A0A0MRZ8 115 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 A0A1W2PNV4 684 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 TMPRSS13Q9BYE2 586 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 DEPPQ9NTK1 212 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 MTCL1Q9Y4B5 1905 aaKnown RBP9.26□□□□□ -0.93
TCOF1-204ENST00000427724 LOC102723996A0A087X1L8 192 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 OR5H1A6NKK0 313 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 AP4M1O00189 453 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ADAM10O14672 748 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ADAM11O75078 769 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF92Q03936 586 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-204ENST00000427724 LHFPL2Q6ZUX7 228 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF485Q8NCK3 441 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 OR52N4Q8NGI2 321 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 OIT3Q8WWZ8 545 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 RIMS4Q9H426 269 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-204ENST00000427724 RNF7Q9UBF6 113 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 MBP02144 154 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 ADRA2CP18825 462 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 RPS4Y1P22090 263 aaKnown RBP9.26□□□□□ -0.93
TCOF1-204ENST00000427724 BTCP35070 178 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 PDLIM4P50479 330 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms