RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TBX15Q96SF7 602 aa20.13■□□□□ 0.81
VEGFA-209ENST00000425836 NICN1Q9BSH3 213 aa20.13■□□□□ 0.81
VEGFA-209ENST00000425836 PCGF1Q9BSM1 259 aa20.13■□□□□ 0.81
VEGFA-209ENST00000425836 SONP18583 2426 aaKnown RBP20.13■□□□□ 0.81
VEGFA-209ENST00000425836 DOCK11Q5JSL3 2073 aa20.13■□□□□ 0.81
VEGFA-209ENST00000425836 MEX3AA1L020 520 aaKnown RBP20.12■□□□□ 0.81
VEGFA-209ENST00000425836 GABARAPO95166 117 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 RPS19P39019 145 aaKnown RBP20.12■□□□□ 0.81
VEGFA-209ENST00000425836 KCNJ3P48549 501 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 VBP1P61758 197 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 CTF1Q16619 201 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 KRBOX4Q5JUW0 171 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 TCF23Q7RTU1 214 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 CMTM4Q8IZR5 234 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 PLPPR1Q8TBJ4 325 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 PEX16Q9Y5Y5 336 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 A0A0A6YYD4 124 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 hADV38S2A0JD32 116 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 FUOMA2VDF0 154 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 M0R1W7 72 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 FSHBP01225 129 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 CCL3L1P16619 93 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 FUT3P21217 361 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 SRP14P37108 136 aaKnown RBP20.12■□□□□ 0.81
VEGFA-209ENST00000425836 KLF17Q5JT82 389 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-209ENST00000425836 RAB12Q6IQ22 244 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 C1orf122Q6ZSJ8 110 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 TEX29Q8N6K0 151 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 NANPQ8TBE9 248 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 URM1Q9BTM9 101 aaKnown RBP20.12■□□□□ 0.81
VEGFA-209ENST00000425836 BARHL1Q9BZE3 327 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 RAB22AQ9UL26 194 aa20.12■□□□□ 0.81
VEGFA-209ENST00000425836 A0A1W2PPH5 198 aa20.11■□□□□ 0.81
VEGFA-209ENST00000425836 RSBN1Q5VWQ0 802 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-209ENST00000425836 FAM89BQ8N5H3 189 aa20.11■□□□□ 0.81
VEGFA-209ENST00000425836 C11orf42Q8N5U0 333 aa20.11■□□□□ 0.81
VEGFA-209ENST00000425836 CYYR1Q96J86 154 aa20.11■□□□□ 0.81
VEGFA-209ENST00000425836 LINC00312Q9Y6C7 94 aa20.11■□□□□ 0.81
VEGFA-209ENST00000425836 ODAMA1E959 279 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 MCRIP1C9JLW8 97 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 H3BUI4 141 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 PDCD6O75340 191 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 IL1AP01583 271 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 EFNB2P52799 333 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 DLX6P56179 175 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 PAX5Q02548 391 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 VMO1Q7Z5L0 202 aa20.1■□□□□ 0.81
VEGFA-209ENST00000425836 NSD1Q96L73 2696 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-209ENST00000425836 GLAP06280 429 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 SRD5A1P18405 259 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 CHATP28329 748 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 SERPINB10P48595 397 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 BLMHQ13867 455 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 NCOR1P1Q9H4R4 102 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 METTL8Q9H825 291 aaKnown RBP20.09■□□□□ 0.81
VEGFA-209ENST00000425836 KIF25Q9UIL4 384 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 WNK2Q9Y3S1 2297 aa20.09■□□□□ 0.81
VEGFA-209ENST00000425836 ZNF728P0DKX0 622 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 SNRPBP14678 240 aaKnown RBP20.08■□□□□ 0.81
VEGFA-209ENST00000425836 BLVRBP30043 206 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-209ENST00000425836 DLX1P56177 255 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 ERVFRD-1P60508 538 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 RBM39Q14498 530 aaKnown RBP20.08■□□□□ 0.81
VEGFA-209ENST00000425836 NKAPLQ5M9Q1 402 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 IDNKQ5T6J7 187 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 NEK7Q8TDX7 302 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 CORO2AQ92828 525 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 ZNF714Q96N38 554 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 NEDD4LQ96PU5 975 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 SIRT7Q9NRC8 400 aa20.08■□□□□ 0.81
VEGFA-209ENST00000425836 TRGV10A0A0A0MS01 117 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 C17orf98A8MV24 154 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 SOCS1O15524 211 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 PAHP00439 452 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 IGHV4-38-2P0DP08 117 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 RAB6AP20340 208 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 PRB3Q04118 309 aaPredicted RBP20.08■□□□□ 0.8
VEGFA-209ENST00000425836 SLC35E4Q6ICL7 350 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 CLVS1Q8IUQ0 354 aaPredicted RBP20.08■□□□□ 0.8
VEGFA-209ENST00000425836 PTX4Q96A99 478 aa20.08■□□□□ 0.8
VEGFA-209ENST00000425836 UNKLQ9H9P5 680 aaKnown RBP20.08■□□□□ 0.8
VEGFA-209ENST00000425836 UBE2J1Q9Y385 318 aaPredicted RBP20.08■□□□□ 0.8
VEGFA-209ENST00000425836 IGHV3OR16-10A0A075B7F0 116 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 MEIKINA0A087WXM9 373 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 UBE2QL1A1L167 161 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 FOXI3A8MTJ6 420 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-209ENST00000425836 PRTN3P24158 256 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 VEGFCP49767 419 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 C6orf201Q7Z4U5 140 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 TRAPPC6BQ86SZ2 158 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 CROCCP3Q8IVE0 287 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 TNFRSF14Q92956 283 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 ETAA1Q9NY74 926 aa20.07■□□□□ 0.8
VEGFA-209ENST00000425836 TRAV40A0A0B4J280 105 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 CENPVL3A0A0U1RRI6 287 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 TMEM30CPA0ZSE6 113 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 FAM157CP0CG43 387 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 ZNF497Q6ZNH5 498 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 RTN4RL2Q86UN3 420 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 LGALS14Q8TCE9 139 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms