RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TMEM267Q0VDI3 215 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 SGCBQ16585 318 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 IQCJQ1A5X6 159 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 C2orf27AQ580R0 203 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 SPIN3Q5JUX0 258 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 SLC16A14Q7RTX9 510 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 TMEM252Q8N6L7 170 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 LIPHQ8WWY8 451 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 FOXJ2Q9P0K8 574 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 SLC17A4Q9Y2C5 497 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 A0A1W2PNV4 684 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 LINC01565O15544 149 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 DDAH2O95865 285 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 SPINK2P20155 84 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 DUSP1P28562 367 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 BIDP55957 195 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 KCNMB1Q16558 191 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 NAA60Q9H7X0 242 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 TLE4Q04727 773 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 C1orf61Q13536 156 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 ZNF506Q5JVG8 444 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 FNDC7Q5VTL7 733 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 ZNF100Q8IYN0 542 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 TDHQ8IZJ6 230 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 C11orf42Q8N5U0 333 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 CPEB3Q8NE35 698 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 RNF133Q8WVZ7 376 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 TBL1XR1Q9BZK7 514 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 RBKSQ9H477 322 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 RPRMQ9NS64 109 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 COLQQ9Y215 455 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 CLDN16Q9Y5I7 305 aa9.8□□□□□ -0.84
SEC61A1-202ENST00000424880 CABIN1Q9Y6J0 2220 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 TRAV34A0A0B4J273 112 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 ZNHIT1O43257 154 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 HSPA12AO43301 675 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 EGR1P18146 543 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 BRS3P32247 399 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 NKX2-1P43699 371 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 GATAD1Q8WUU5 269 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 TMEM18Q96B42 140 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 NUDT16L1Q9BRJ7 211 aaKnown RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 RPP25Q9BUL9 199 aaKnown RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 PCED1AQ9H1Q7 454 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 NKX2-4Q9H2Z4 354 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 ANXA10Q9UJ72 324 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 SDK2Q58EX2 2172 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 A0A0U1RQK1 487 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 SEMA4FO95754 770 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 IL6RP08887 468 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 CHRNA7P36544 502 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 GALR1P47211 349 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 ZNF266Q14584 549 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 SHISA6Q6ZSJ9 500 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 TCF23Q7RTU1 214 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 ODF3L1Q8IXM7 274 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 BAHD1Q8TBE0 780 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 HOXB13Q92826 284 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 MSI2Q96DH6 328 aaKnown RBP9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 HDAC8Q9BY41 377 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 SDF2L1Q9HCN8 221 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 KLHL13Q9P2N7 655 aa9.79□□□□□ -0.84
SEC61A1-202ENST00000424880 LRRC3CA6NJW4 275 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 A8MXE2 369 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 MS4A18H0YCH9 400 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ETV2O00321 342 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ADAM20O43506 726 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 LCATP04180 440 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 GP1BBP13224 206 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 CEACAM8P31997 349 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 MS4A18Q3C1V0 323 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ZNF787Q6DD87 383 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 TMPRSS7Q7RTY8 843 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 UEVLDQ8IX04 471 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ASXL3Q9C0F0 2248 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 YLPM1P49750 1951 aaKnown RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 LOC102724200A0A096LPH7 203 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 CHST1O43916 411 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 OR1D4P47884 311 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 KIR2DS3Q14952 304 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 MMDQ15546 238 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 RIPPLY2Q5TAB7 128 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ARMC6Q6NXE6 501 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 LIAT1Q6ZQX7 453 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 ANGPTL4Q9BY76 406 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 GSX1Q9H4S2 264 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 TUBG2Q9NRH3 451 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 NAGKQ9UJ70 344 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 URB1O60287 2271 aaKnown RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 DCHS1Q96JQ0 3298 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 MUC22E2RYF6 1773 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 TSPAN2O60636 221 aa9.78□□□□□ -0.84
SEC61A1-202ENST00000424880 GCH1P30793 250 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms