RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNF485Q8NCK3 441 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 OR10K1Q8NGX5 313 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 CITED1Q99966 193 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 MND1Q9BWT6 205 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 PCDHB16Q9NRJ7 776 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 PAK1IP1Q9NWT1 392 aaPredicted RBP12.4□□□□□ -0.42
NUP50-204ENST00000417702 OR6C3Q9NZP0 311 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
NUP50-204ENST00000417702 PNMA8CA0A1B0GUJ8 204 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 HSPB6O14558 160 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 TIMM23O14925 209 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 DENRO43583 198 aaKnown RBP12.39□□□□□ -0.43
NUP50-204ENST00000417702 MMP23AO75900 390 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 CDRT1O95170 752 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
NUP50-204ENST00000417702 CRHBPP24387 322 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 CDK2P24941 298 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 RTN4RL2Q86UN3 420 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 ABHD12Q8N2K0 398 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 Q8NFD4 153 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 OR4D6Q8NGJ1 314 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 PIFOQ8TCI5 191 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 COQ2Q96H96 371 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 PGLYRP3Q96LB9 341 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 NKX3-1Q99801 234 aaPredicted RBP12.39□□□□□ -0.43
NUP50-204ENST00000417702 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 DUSP21Q9H596 190 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 RANBP3Q9H6Z4 567 aaPredicted RBP12.39□□□□□ -0.43
NUP50-204ENST00000417702 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
NUP50-204ENST00000417702 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
NUP50-204ENST00000417702 H3BUI4 141 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 M0QZ24 198 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 RGS10O43665 173 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
NUP50-204ENST00000417702 GPX5O75715 221 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 IGFBP3P17936 291 aaPredicted RBP12.38□□□□□ -0.43
NUP50-204ENST00000417702 CELP19835 753 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 HTR1DP28221 377 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 KCNJ3P48549 501 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 RAB13P51153 203 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 RPS11P62280 158 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUP50-204ENST00000417702 PIGYQ3MUY2 71 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 LDLRAD2Q5SZI1 272 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 OSR2Q8N2R0 312 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ORAI1Q96D31 301 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 OR14A2Q96R54 314 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 CCDC90BQ9GZT6 254 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 NCOR1P1Q9H4R4 102 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 IL36GQ9NZH8 169 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
NUP50-204ENST00000417702 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 F2RL2O00254 374 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 TOR1AO14656 332 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
NUP50-204ENST00000417702 CD1AP06126 327 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 FSTP19883 344 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 GLP1RP43220 463 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 DYNLT3P51808 116 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 KRTAP10-3P60369 221 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 BDH1Q02338 343 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 THRSPQ92748 146 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
NUP50-204ENST00000417702 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
NUP50-204ENST00000417702 TRAV8-7A0A075B6U6 113 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 TRBV5-7A0A0A0MS05 114 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 CHST1O43916 411 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 SERPINA2P20848 420 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 MAPK3P27361 379 aaPredicted RBP12.36□□□□□ -0.43
NUP50-204ENST00000417702 CD34P28906 385 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 PRRX1P54821 245 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
NUP50-204ENST00000417702 GPR176Q14439 515 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 IRF3Q14653 427 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 SLC22A6Q4U2R8 563 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 NHLRC3Q5JS37 347 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 PRSS48Q7RTY5 328 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 SGCDQ92629 289 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms