RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 FAM219AQ8IW50 185 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 Q8IYB0 196 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 SCCPDHQ8NBX0 429 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 CTDSP1Q9GZU7 261 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 CNTD2Q9H8S5 307 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 LIPGQ9Y5X9 500 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 TRAV8-7A0A075B6U6 113 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 SIRPB1O00241 398 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 SPRY3O43610 288 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 CLN5O75503 358 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 SLC25A4P12235 298 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 UBE2G2P60604 165 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
SCAF8-203ENST00000417268 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
SCAF8-203ENST00000417268 RECKO95980 971 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 ASAH2BP0C7U1 165 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 MUC1P15941 1255 aaPredicted RBP11.23□□□□□ -0.61
SCAF8-203ENST00000417268 TMEM241Q24JQ0 296 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CATSPERDQ86XM0 798 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 OR2C3Q8N628 320 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 TLNRD1Q9H1K6 362 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 KCNE5Q9UJ90 142 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 TMED3Q9Y3Q3 217 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 COL4A6Q14031 1691 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 EIF3GO75821 320 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CD3EP07766 207 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 TIGITQ495A1 244 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 NSUN5P2Q63ZY6 315 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 SSX8Q7RTT4 187 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 OR2AE1Q8NHA4 323 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 AICDAQ9GZX7 198 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CLCF1Q9UBD9 225 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 CCL21O00585 134 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
SCAF8-203ENST00000417268 GPM6AP51674 278 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 KLF3P57682 345 aaPredicted RBP11.23□□□□□ -0.61
SCAF8-203ENST00000417268 C1orf185Q5T7R7 199 aa11.23□□□□□ -0.61
SCAF8-203ENST00000417268 ZNF385AQ96PM9 386 aaKnown RBP11.23□□□□□ -0.61
SCAF8-203ENST00000417268 MASP2O00187 686 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 FGF2P09038 288 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 EFNB2P52799 333 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 OR10AC1Q8NH08 325 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
SCAF8-203ENST00000417268 OPN1MWP04001 364 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 TMEM183BQ1AE95 376 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 CDC20BQ86Y33 519 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-203ENST00000417268 TMEM38BQ9NVV0 291 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 THADAQ6YHU6 1953 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 CCDC88CQ9P219 2028 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 CLEC18AA5D8T8 446 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-203ENST00000417268 GABRA4P48169 554 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 DLK1P80370 383 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 CLEC18CQ8NCF0 446 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 SCNM1Q9BWG6 230 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 PARP11Q9NR21 331 aa11.22□□□□□ -0.61
SCAF8-203ENST00000417268 A0A0B4J293 547 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 C16orf97H3BN30 126 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 PMCHP20382 165 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 INO80CQ6PI98 192 aaPredicted RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 FAM214BQ7L5A3 538 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 FDCSPQ8NFU4 85 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 OR5H1A6NKK0 313 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 OR4C45A6NMZ5 311 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 ENSAO43768 121 aaKnown RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 TBX6O95947 436 aaPredicted RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 DTYMKP23919 212 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 KISS1Q15726 138 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 ZCCHC14Q8WYQ9 949 aaKnown RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 PINX1Q96BK5 328 aaKnown RBP11.21□□□□□ -0.61
SCAF8-203ENST00000417268 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 OR5AC1P0C628 307 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 CA6P23280 308 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 ERVS71-1P61550 626 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 UBE2V2Q15819 145 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 ZNF596Q8TC21 504 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 EXTL1Q92935 676 aa11.21□□□□□ -0.61
SCAF8-203ENST00000417268 C9orf172C9J069 976 aa11.21□□□□□ -0.62
SCAF8-203ENST00000417268 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms