RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 Q6ZSR3 168 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHMP1BQ7LBR1 199 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC36A1Q7Z2H8 476 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMIM15Q7Z3B0 74 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CEACAM19Q7Z692 300 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRAPPC5Q8IUR0 188 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 C15orf54Q8N8G6 183 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 NUP37Q8NFH4 326 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 BEST4Q8NFU0 473 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2L5Q8NG80 312 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR1J4Q8NGS1 313 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR10K1Q8NGX5 313 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF519Q8TB69 540 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 LGALS14Q8TCE9 139 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 GATAD1Q8WUU5 269 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 NEIL2Q969S2 332 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TM4SF18Q96CE8 201 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 MALSU1Q96EH3 234 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC35G5Q96KT7 338 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 AIF1LQ9BQI0 150 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 RIOK2Q9BVS4 552 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR51M1Q9H341 326 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR51I1Q9H343 314 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 C5orf66Q9H5L9 145 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM100Q9NV29 134 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PLEKHJ1Q9NW61 149 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 GNG12Q9UBI6 72 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 MTFP1Q9UDX5 166 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 MIOXQ9UGB7 285 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 HS3ST2Q9Y278 367 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 YARS2Q9Y2Z4 477 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 MOB4Q9Y3A3 225 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRPM7Q96QT4 1865 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 PCM1Q15154 2024 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 KIAA1671Q9BY89 1806 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRBV6-7A0A0A0MS04 114 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A1B0GTI1 187 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 KANTRA0A1W2PQU2 76 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 LRP5LA4QPB2 252 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 RIIAD1A6NNX1 92 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM150CB9EJG8 249 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 DISC1C4P0D8 188 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 BHLHE40O14503 412 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GOSR2O14653 212 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHEK1O14757 476 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARPC1BO15143 372 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MAGEB4O15481 346 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 P2RX6O15547 441 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 BCL2L11O43521 198 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SYT7O43581 403 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSPAN13O95857 204 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 C1QCP02747 245 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MT-ND4P03905 459 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SERPINA5P05154 406 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 KLK1P06870 262 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TACSTD2P09758 323 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GKN3PP0CG01 181 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 AKAIN1P0CW23 69 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD37P11049 281 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ATF1P18846 271 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TBPP20226 339 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 BCKDHBP21953 392 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC2A5P22732 501 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GLRA1P23415 457 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD1CP29017 333 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MPIP34949 423 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SFTPDP35247 375 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 OPRD1P41143 372 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 NBL1P41271 181 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SRP9P49458 86 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CCR6P51684 374 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARPP19P56211 112 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CAV3P56539 151 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 RAB5BP61020 215 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 UBE2MP61081 183 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS24P62847 133 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ECH1Q13011 328 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARL6IP1Q15041 203 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 CDK5R1Q15078 307 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM255AQ5JRV8 349 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TIMM23BQ5SRD1 257 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 HES5Q5TA89 166 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GLT8D1Q68CQ7 371 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAM199XQ6PEV8 388 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 HAGHLQ6PII5 290 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ALKAL2Q6UX46 152 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 APOOLQ6UXV4 268 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACOT7LQ6ZUV0 252 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ANGPTL5Q86XS5 388 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 PUSL1Q8N0Z8 303 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF561Q8N587 486 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM229BQ8NBD8 167 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACBD4Q8NC06 268 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC30A7Q8NEW0 376 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4D11Q8NGI4 311 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5D16Q8NGK9 328 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR13C5Q8NGS8 318 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms