RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 DVL1P1P54792 670 aaPredicted RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 NDUFA6P56556 154 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TMEM50BP56557 158 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 SNRPD1P62314 119 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 RPL31P62899 125 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 CDK3Q00526 305 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 PSG4Q00888 419 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 IL10RBQ08334 325 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 PLCXD2Q0VAA5 305 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR2F1Q13607 317 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 FHL2Q14192 279 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 EIF2B1Q14232 305 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF266Q14584 549 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 HERPUD1Q15011 391 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 EXOSC7Q15024 291 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 SSX1Q16384 188 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 UPP1Q16831 310 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TMEM241Q24JQ0 296 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TP53I3Q53FA7 332 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 HES3Q5TGS1 186 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 GRHL2Q6ISB3 625 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 FAM166AQ6J272 317 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ANKRD16Q6P6B7 361 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 Q71RC1 249 aaPredicted RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 LARP4Q71RC2 724 aaKnown RBP eCLIP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 CMC1Q7Z7K0 106 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 MOB3BQ86TA1 216 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 DTX2Q86UW9 622 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 PIGZQ86VD9 579 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 SLC30A8Q8IWU4 369 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 KLHDC8BQ8IXV7 354 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF440Q8IYI8 595 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 PARP16Q8N5Y8 322 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 CHST4Q8NCG5 386 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF548Q8NEK5 533 aaPredicted RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 BPIFB6Q8NFQ5 453 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR8D4Q8NGM9 314 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR13J1Q8NGT2 312 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR4L1Q8NH43 312 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 CNIH3Q8TBE1 160 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 NUP210Q8TEM1 1887 aaPredicted RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TFB1MQ8WVM0 346 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 C10orf82Q8WW14 230 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 PTX4Q96A99 478 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TM4SF18Q96CE8 201 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF488Q96MN9 340 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 FYTTD1Q96QD9 318 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 F2RL3Q96RI0 385 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 MRPL57Q9BQC6 102 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 NRIP2Q9BQI9 281 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ULBP3Q9BZM4 244 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 VN1R1Q9GZP7 353 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 CBLN4Q9NTU7 201 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 MRPS18AQ9NVS2 196 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 NAT8Q9UHE5 227 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 LAMP3Q9UQV4 416 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 TRAPPC4Q9Y296 219 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 POLDIP2Q9Y2S7 368 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 SIGLEC9Q9Y336 463 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 RNF115Q9Y4L5 304 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 LSM4Q9Y4Z0 139 aaKnown RBP3.4□□□□□ -1.87
LINC01048-201ENST00000414480 OR51B2Q9Y5P1 312 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ETV7Q9Y603 341 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 ADGRG4Q8IZF6 3080 aa3.4□□□□□ -1.87
LINC01048-201ENST00000414480 MED13Q9UHV7 2174 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 MYLKQ15746 1914 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CEP192Q8TEP8 1941 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 OR4C46A6NHA9 309 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 LILRA5A6NI73 299 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 FAM159BA6NKW6 160 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF850A8MQ14 1090 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 J3KT08 172 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 M0QZQ0 153 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 OR7A17O14581 309 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 HSD17B6O14756 317 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 MYL12BO14950 172 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 PPIHO43447 177 aaKnown RBP3.39□□□□□ -1.87
LINC01048-201ENST00000414480 MRPS14O60783 128 aaKnown RBP3.39□□□□□ -1.87
LINC01048-201ENST00000414480 ZG16O60844 167 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 STK16O75716 305 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 MMP23AO75900 390 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 NCR1O76036 304 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 ZNF432O94892 652 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 SOX14O95416 240 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CLDN1O95832 211 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 EML2O95834 649 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 TOMM40O96008 361 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 IGHV2-5P01817 119 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 AMBPP02760 352 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 OPN1SWP03999 348 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CSN2P05814 226 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CT62P0C5K7 136 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 SMIM17P0DL12 118 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 OR12D1P0DN82 309 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 ACP2P11117 423 aa3.39□□□□□ -1.87
LINC01048-201ENST00000414480 CD79AP11912 226 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms