RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PRAMEF5Q5TYX0 476 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 Q6P435 159 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 SLC16A12Q6ZSM3 486 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 Q8N2B8 174 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 Q8NFD4 153 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 OR4P4Q8NGL7 312 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 OR9G1Q8NH87 305 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 CNIH3Q8TBE1 160 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 PIFOQ8TCI5 191 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 LIN7BQ9HAP6 207 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 TAS2R4Q9NYW5 299 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 HILPDAQ9Y5L2 63 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 TET2Q6N021 2002 aaPredicted RBP7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 WNK1Q9H4A3 2382 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 MEIKINA0A087WXM9 373 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 MEX3AA1L020 520 aaKnown RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 OGG1O15527 345 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 CHST1O43916 411 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 HTR3BO95264 441 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 IL1AP01583 271 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 IGLV1-47P01700 117 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 GTF2F2P13984 249 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 FSTP19883 344 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 NFYBP25208 207 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 CAPGP40121 348 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 VDAC2P45880 294 aaPredicted RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 GLIPR1P48060 266 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 ETV1P50549 477 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 GTF2A1P52655 376 aaPredicted RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 DEFA6Q01524 100 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 EMX1Q04741 257 aaPredicted RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 SMN1Q16637 294 aaKnown RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 LRRC36Q1X8D7 754 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 HLA-DRB5Q30154 266 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 TMEM30BQ3MIR4 351 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 OR2G6Q5TZ20 316 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 ASCL4Q6XD76 172 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 CDH26Q8IXH8 852 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 OSR2Q8N2R0 312 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 STX19Q8N4C7 294 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 NKAIN3Q8N8D7 197 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 OR4F17Q8NGA8 305 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 CFHR4Q92496 578 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 RPEQ96AT9 228 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 MRPS24Q96EL2 167 aaKnown RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 OR4F4Q96R69 305 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 NR1H4Q96RI1 486 aaPredicted RBP7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 IFT22Q9H7X7 185 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 CALYQ9NYX4 217 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 ING4Q9UNL4 249 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 ST3GAL6Q9Y274 331 aa7.32□□□□□ -1.24
SNORD88A-201ENST00000408314 TRBV5-5A0A0J9YX44 114 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TMEM30CPA0ZSE6 113 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A22PA8MWA6 464 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 WIPF1O43516 503 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 XPNPEP2O43895 674 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 GPX5O75715 221 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 OR7C1O76099 320 aaPredicted RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 OR2F2O95006 317 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TSPAN15O95858 294 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 CD1AP06126 327 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 LPLP06858 475 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM106CPP0CH98 169 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 GZMHP20718 246 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 RAB7AP51149 207 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 RBM11P57052 281 aaKnown RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 ST3GAL4Q11206 333 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 MADCAM1Q13477 382 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 RBM39Q14498 530 aaKnown RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TPTE2P1Q5T6R2 138 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 DMKNQ6E0U4 476 aaPredicted RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TMEM219Q86XT9 240 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 DYNAPQ8N1N2 210 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 RGP1Q92546 391 aaPredicted RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 GHSRQ92847 366 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TOMM40LQ969M1 308 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 COQ2Q96H96 371 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 KIRREL1Q96J84 757 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF184Q99676 751 aaPredicted RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 DPCDQ9BVM2 203 aaPredicted RBP7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 MMP28Q9H239 520 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 LINC00574Q9H8X3 128 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF286AQ9HBT8 521 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 ING3Q9NXR8 418 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 IDI2-AS1Q9NZ38 188 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 KIF25Q9UIL4 384 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 ERGIC3Q9Y282 383 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
SNORD88A-201ENST00000408314 TRAV24A0A0B4J272 114 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 BUB1B-PAK6H3BSN5 160 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 HSPB6O14558 160 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 CASQ2O14958 399 aaPredicted RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 CA11O75493 328 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 CLIC3O95833 236 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OPN1MWP04001 364 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OPN1MW2P0DN77 364 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OPN1MW3P0DN78 364 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 SERPINA2P20848 420 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms