RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 Q6ZNB5 142 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 TM4SF19Q96DZ7 209 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 SNX22Q96L94 193 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 DPH3P1Q9H4G8 78 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 OTPQ5XKR4 325 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
LDLRAD4-203ENST00000399848 HIST1H1EP10412 219 aaKnown RBP11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 COL8A1P27658 744 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 PRSS50Q9UI38 385 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 CCL7P80098 99 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 BPIFA4PQ86YQ2 179 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 PCDHGA9Q9Y5G4 932 aaKnown RBP11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 MPDZO75970 2070 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 PRF1P14222 555 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 GABRA1P14867 456 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 GABRG3Q99928 467 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 GHITMQ9H3K2 345 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 ZNF107Q9UII5 783 aaPredicted RBP11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 ZMIZ1Q9ULJ6 1067 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 A6NJY4 79 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 M0R3E3 92 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 NKX2-2O95096 273 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 ZNF774Q6NX45 483 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 MRGPRX3Q96LB0 322 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 C4orf45Q96LM5 186 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 XAF1Q6GPH4 301 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 TNFRSF12AQ9NP84 129 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 SSX1Q16384 188 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 LRRC61Q9BV99 259 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 STARD10Q9Y365 291 aa11.9□□□□□ -0.5
LDLRAD4-203ENST00000399848 SIAH2O43255 324 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 G6PCP35575 357 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 SLC35E3Q7Z769 313 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 CCL17Q92583 94 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 TP53RKQ96S44 253 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 SLC25A33Q9BSK2 321 aa11.9□□□□□ -0.51
LDLRAD4-203ENST00000399848 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 CTDSPLO15194 276 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR10J1P30954 320 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 CADM4Q8NFZ8 388 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 DNAJB12Q9NXW2 375 aaKnown RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 TMEFF2Q9UIK5 374 aaPredicted RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 RBBP6Q7Z6E9 1792 aaKnown RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 CCL21O00585 134 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRKNO60260 465 aaPredicted RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF253O75346 499 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PKIAP61925 76 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 RTP5Q14D33 572 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 TCTN1Q2MV58 587 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PLPPR2Q96GM1 343 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF117Q03924 483 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 TBC1D26Q86UD7 250 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF385DQ9H6B1 395 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 FOXO1Q12778 655 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 C1RLQ9NZP8 487 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ANXA10Q9UJ72 324 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 SCN7AQ01118 1682 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 SLC25A30Q5SVS4 291 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 MIEN1Q9BRT3 115 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 MPC1Q9Y5U8 109 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 LIPGQ9Y5X9 500 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 CXorf1O96002 111 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF32P17041 273 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZXDAP98168 799 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 AWAT1Q58HT5 328 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 DPPA3Q6W0C5 159 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 GNG7O60262 68 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 POM121Q96HA1 1249 aa11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF552Q9H707 407 aaPredicted RBP11.89□□□□□ -0.51
LDLRAD4-203ENST00000399848 PATJQ8NI35 1801 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 ANKRD20A5PA0PJZ0 165 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 CD226Q15762 336 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 CARFQ8N187 725 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 STARD4Q96DR4 205 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 MS4A7Q9GZW8 240 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 FMODQ06828 376 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 STPG2Q8N412 459 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 TMEM251Q8N6I4 163 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 MYLKQ15746 1914 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 C9orf172C9J069 976 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms