RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RBP2P50120 134 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 ATP1B3P54709 279 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 CXCR4P61073 352 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 CFHR3Q02985 330 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 MYOZ3Q8TDC0 251 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 HAVCR2Q8TDQ0 301 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 COQ2Q96H96 371 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 CNN2Q99439 309 aaKnown RBP7.32□□□□□ -1.24
NEDD9-203ENST00000397378 TEX12Q9BXU0 123 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 COMMD4Q9H0A8 199 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 LINC00574Q9H8X3 128 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 SLC25A19Q9HC21 320 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 EXOSC4Q9NPD3 245 aaKnown RBP7.32□□□□□ -1.24
NEDD9-203ENST00000397378 OR6C3Q9NZP0 311 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF580Q9UK33 172 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 MAGEB4O15481 346 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-203ENST00000397378 SYT7O43581 403 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 MPZL2O60487 215 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 PSMB8P28062 276 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 POU3F4P49335 361 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 SNU13P55769 128 aaKnown RBP7.31□□□□□ -1.24
NEDD9-203ENST00000397378 RUNX1Q01196 453 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 DIAPH2-AS1Q14236 149 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
NEDD9-203ENST00000397378 KRBOX4Q5JUW0 171 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 PLEKHG7Q6ZR37 379 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 FAM71E2Q8N5Q1 922 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 Q8N6K4 173 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 Q8N9W7 124 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 CHST4Q8NCG5 386 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 PP6455Q8WZ26 134 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-203ENST00000397378 NCOR1P1Q9H4R4 102 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 ISYNA1Q9NPH2 558 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 KRT84Q9NSB2 600 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 MRM2Q9UI43 246 aaKnown RBP7.31□□□□□ -1.24
NEDD9-203ENST00000397378 PSG11Q9UQ72 335 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 GSTK1Q9Y2Q3 226 aa7.31□□□□□ -1.24
NEDD9-203ENST00000397378 NCBP2LA6PVI3 153 aaKnown RBP7.3□□□□□ -1.24
NEDD9-203ENST00000397378 I3L521 148 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 CALCBP10092 127 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF616Q08AN1 781 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-203ENST00000397378 PDZK1IP1Q13113 114 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ASPHD1Q5U4P2 390 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 TMEM236Q5W0B7 351 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 Q6P435 159 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 SLC16A12Q6ZSM3 486 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 CATSPERDQ86XM0 798 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 SLC35F2Q8IXU6 374 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 IZUMO1Q8IYV9 350 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 DEFB107AQ8IZN7 70 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF565Q8N9K5 539 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ST6GALNAC6Q969X2 333 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 UBE2E2Q96LR5 201 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 OSBPL10Q9BXB5 764 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF556Q9HAH1 456 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 RHOFQ9HBH0 211 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 NDE1Q9NXR1 346 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 IDI2-AS1Q9NZ38 188 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 RABL2BQ9UNT1 228 aa7.3□□□□□ -1.24
NEDD9-203ENST00000397378 MUC4Q99102 2169 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IGKV1-9A0A0C4DH69 117 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IGKV1-12A0A0C4DH73 117 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 FAM25EA8MYX2 175 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 NPIPB11E5RHQ5 1161 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF670-ZNF695F2Z2N8 137 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 H3BSH0 61 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 SLC33A1O00400 549 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-203ENST00000397378 OVOL1O14753 267 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 SAP30O75446 220 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 DEDDO75618 318 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 KDM4BO94953 1096 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 CST1P01037 141 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IL1AP01583 271 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IGKV1D-12P01611 117 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 IGF1P05019 195 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 OR5H8P0DN80 308 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 RAP2AP10114 183 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF44P15621 663 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 VDAC1P21796 283 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 PRKACBP22694 351 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 CNTFRP26992 372 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 MTNR1BP49286 362 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 MTCP1P56278 107 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 BNIP1Q12981 228 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 KIAA0141Q14154 515 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-203ENST00000397378 ATXN7L3Q14CW9 347 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-203ENST00000397378 ODF4Q2M2E3 257 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 UTS2BQ765I0 119 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 TMEM179BQ7Z7N9 219 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 DHFR2Q86XF0 187 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 OR10A7Q8NGE5 316 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 OR51T1Q8NGJ9 327 aa7.29□□□□□ -1.24
NEDD9-203ENST00000397378 OR1N2Q8NGR9 330 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms