RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ZNF331Q9NQX6 463 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-202ENST00000393943 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-202ENST00000393943 TOX3O15405 576 aaPredicted RBP7.53□□□□□ -1.2
GABRA1-202ENST00000393943 CBR3O75828 277 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 GFERP55789 205 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 TAS2R45P59539 299 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 IGFBP7Q16270 282 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 TMEM230Q96A57 120 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 RSPO3Q9BXY4 272 aaPredicted RBP7.53□□□□□ -1.2
GABRA1-202ENST00000393943 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 UBE2L5PA0A1B0GUS4 154 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 FAM221AA4D161 298 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 C2orf72A6NCS6 295 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 VENTXO95231 258 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 IAPPP10997 89 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 LCN2P80188 198 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 PHYHD1Q5SRE7 291 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 C9orf40Q8IXQ3 194 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 FAM58AQ8N1B3 248 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 PRR18Q8N4B5 295 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 OR10AD1Q8NGE0 317 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 OR10V1Q8NGI7 309 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 ERGIC1Q969X5 290 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 MUCL1Q96DR8 90 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 SDSLQ96GA7 329 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 FRMPD3Q5JV73 1810 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 HEATR5BQ9P2D3 2071 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 A6NCN8 305 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 MS4A18H0YCH9 400 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 SH2D1BO14796 132 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 PRKNO60260 465 aaPredicted RBP7.53□□□□□ -1.2
GABRA1-202ENST00000393943 PGA4P0DJD7 388 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 GLB1P16278 677 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 CCL1P22362 96 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 G0S2P27469 103 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 RPL29P47914 159 aaKnown RBP7.53□□□□□ -1.2
GABRA1-202ENST00000393943 MS4A18Q3C1V0 323 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 PRAMEF20Q5VT98 475 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 NUFIP2Q7Z417 695 aaKnown RBP7.53□□□□□ -1.2
GABRA1-202ENST00000393943 BHLHE23Q8NDY6 225 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 TMEM9BQ9NQ34 198 aa7.53□□□□□ -1.2
GABRA1-202ENST00000393943 SLC25A6P12236 298 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 GABRA4P48169 554 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.2
GABRA1-202ENST00000393943 MEF2BQ02080 365 aaPredicted RBP7.52□□□□□ -1.2
GABRA1-202ENST00000393943 PLAC9Q5JTB6 97 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 TMEM240Q5SV17 173 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 BEND2Q8NDZ0 799 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 OR10G9Q8NGN4 311 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 OR10G7Q8NGN6 311 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 PLSCR2Q9NRY7 297 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 GOLT1BQ9Y3E0 138 aa7.52□□□□□ -1.2
GABRA1-202ENST00000393943 MYOFQ9NZM1 2061 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 OR5B21A6NL26 309 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 H0YL77 283 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TOX4O94842 621 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 PGA5P0DJD9 388 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 MYOGP15173 224 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF154Q13106 437 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 FFAR4Q5NUL3 377 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 OR5AS1Q8N127 324 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF611Q8N823 705 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 C22orf15Q8WYQ4 148 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 VOPP1Q96AW1 172 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 FOXB1Q99853 325 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 CACNG5Q9UF02 275 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ZDHHC8Q9ULC8 765 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TIMM9Q9Y5J7 89 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 A0A1B0GV90 55 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 OR2W5A6NFC9 320 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 K7N7A8 449 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 SPINT2O43291 252 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 RBM11P57052 281 aaKnown RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 FHL1Q13642 323 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 GAMTQ14353 236 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 RTL8BQ17RB0 113 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 SMIM15Q7Z3B0 74 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 MRPL30Q8TCC3 161 aaKnown RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 HEYLQ9NQ87 328 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 SLC35D1Q9NTN3 355 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 SERTAD4Q9NUC0 356 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 LHFPL6Q9Y693 200 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 IGHV5-51A0A0C4DH38 117 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ASCL1P50553 236 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 OR1D5P58170 312 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM267Q0VDI3 215 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF124Q15973 351 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 FBXO46Q6PJ61 603 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 C16orf82Q7Z2V1 217 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 ANKRD37Q7Z713 158 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 RPS19BP1Q86WX3 136 aaKnown RBP7.52□□□□□ -1.21
GABRA1-202ENST00000393943 GCM1Q9NP62 436 aa7.52□□□□□ -1.21
GABRA1-202ENST00000393943 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
GABRA1-202ENST00000393943 K7EQS6 105 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms