RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ANKRD23Q86SG2 305 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 LRRC6Q86X45 466 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC38A6Q8IZM9 456 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 EIF4E3Q8N5X7 224 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR51G2Q8NGK0 314 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2V1Q8NHB1 315 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC26A7Q8TE54 656 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SMCR5Q8TEV8 140 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC13A3Q8WWT9 602 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ATL1Q8WXF7 558 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PSMF1Q92530 271 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 FAM162AQ96A26 154 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TUBGCP3Q96CW5 907 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 LINC00052Q96N35 136 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TSSK2Q96PF2 358 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ALS2CR12Q96Q35 445 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 KCNK16Q96T55 309 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SERPINI1Q99574 410 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 BCL7BQ9BQE9 202 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 RIOK2Q9BVS4 552 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 GBA3Q9H227 469 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CENPHQ9H3R5 247 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CHMP4BQ9H444 224 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ASB7Q9H672 318 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 LAMTOR3Q9UHA4 124 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CD84Q9UIB8 345 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAPPC2LQ9UL33 140 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 POLR1DQ9Y2S0 133 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 KCNE2Q9Y6J6 123 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 KDM3BQ7LBC6 1761 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCDC144AA2RUR9 1427 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 RTL9Q8NET4 1388 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TNIKQ9UKE5 1360 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRPM2O94759 1503 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIF1AQ12756 1690 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PBRM1Q86U86 1689 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SYNRGQ9UMZ2 1314 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SYNJ2O15056 1496 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERCC6Q03468 1493 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 CD163L1Q9NR16 1453 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIF21BO75037 1637 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 RGPD3A6NKT7 1758 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 MYH7P12883 1935 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ISPDA4D126 451 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 K7EPK0 472 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NDUFS8O00217 210 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC31A1O15431 190 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 GNRH2O43555 120 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 CREB3O43889 395 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 B3GALNT1O75752 331 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 LDOC1O95751 146 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OAS1P00973 400 aaKnown RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 PPBPP02775 128 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 P04436 131 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 APODP05090 189 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 EIF2S1P05198 315 aaKnown RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 C4AP0C0L4 1744 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 C4BP0C0L5 1744 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZNF728P0DKX0 622 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SCGB1A1P11684 91 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 FERP16591 822 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 BDNFP23560 247 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 IMPA1P29218 277 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 MAGEA1P43355 309 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NUDT2P50583 147 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCR9P51686 369 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ARFIP1P53367 373 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 CRYBB1P53674 252 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2B6P58173 313 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 IL10RBQ08334 325 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 LRRC74AQ0VAA2 488 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 IL24Q13007 206 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ECH1Q13011 328 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 PCLAFQ15004 111 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR8G1Q15617 311 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 CHI3L2Q15782 390 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 BAK1Q16611 211 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 PDK4Q16654 411 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SPHKAPQ2M3C7 1700 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 MPV17LQ2QL34 196 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRIM16LQ309B1 348 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM155Q4W5P6 130 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 MPP7Q5T2T1 576 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 C6orf183Q5T699 404 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 FAM74A4Q5TZK3 123 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 C1orf146Q5VVC0 180 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 METTL21CQ5VZV1 264 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 GIMAP6Q6P9H5 292 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM270Q6UE05 265 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 LYPD5Q6UWN5 251 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OTUD6AQ7L8S5 288 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SSX6Q7RTT6 188 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 AAED1Q7RTV5 226 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SERPINA9Q86WD7 417 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM256Q8N2U0 113 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZFAND2AQ8N6M9 145 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NKAPP1Q8N9T2 125 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR4C16Q8NGL9 310 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 PIGXQ8TBF5 258 aa-1.87□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms