RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ZNHIT1O43257 154 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 RPS4Y1P22090 263 aaKnown RBP9.58□□□□□ -0.88
CLCN4-202ENST00000380833 EMDP50402 254 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 LRRC10Q5BKY1 277 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF660Q6AZW8 331 aaPredicted RBP9.58□□□□□ -0.88
CLCN4-202ENST00000380833 FAHD1Q6P587 224 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 C20orf196Q8IYI0 205 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 ST6GALNAC3Q8NDV1 305 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 C14orf144Q96I85 54 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 H0Y980 276 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 IL9P15248 144 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 P2RY1P47900 373 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 ORAOV1Q8WV07 137 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 WDR13Q9H1Z4 485 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 CARHSP1Q9Y2V2 147 aaKnown RBP9.58□□□□□ -0.88
CLCN4-202ENST00000380833 SEC11BP0C7V7 166 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 SELEP16581 610 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 SFTPA2Q8IWL1 248 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 SFTPA1Q8IWL2 248 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 ASB5Q8WWX0 329 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 NEU1Q99519 415 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 RHNO1Q9BSD3 238 aa9.58□□□□□ -0.88
CLCN4-202ENST00000380833 TRAV8-2A0A0B4J237 113 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SPAARA0A1B0GVQ0 90 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 CDX4O14627 284 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 C16orf47Q6ZP98 133 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 MTFP1Q9UDX5 166 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 C7orf66A4D0T2 115 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 ARRDC5A6NEK1 342 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 C11orf94C9JXX5 98 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SRFP11831 508 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 TFPI2P48307 235 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 IFITM3Q01628 133 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 GUCA2AQ02747 115 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 RTN4RL2Q86UN3 420 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SPACA9Q96E40 222 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 GNRHR2Q96P88 292 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 FNDC4Q9H6D8 234 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 TRGV5A0A0B4J1U4 118 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 DPRXA6NFQ7 191 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 FGF17O60258 216 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 MT-CO3P00414 261 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 TRIP6Q15654 476 aaKnown RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 MYOZ3Q8TDC0 251 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 PTPMT1Q8WUK0 201 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 PCGF1Q9BSM1 259 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 MS4A8Q9BY19 250 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SAP30LQ9HAJ7 183 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 TIMM10BQ9Y5J6 103 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 DNAJC25-GNG10A0A024R161 153 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 A8MXK9 166 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV3-15P01624 115 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 FURINP09958 794 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 TXNIPQ9H3M7 391 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 CACFD1Q9UGQ2 172 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 HS3ST3A1Q9Y663 406 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV6-21A0A0C4DH24 114 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 PLA2G10O15496 165 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 PGA3P0DJD8 388 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 CD40P25942 277 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 DPY19L2P2Q6ZN68 376 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SYS1Q8N2H4 156 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 A4GALTQ9NPC4 353 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 G6PC2Q9NQR9 355 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 GPR84Q9NQS5 396 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SLC17A5Q9NRA2 495 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF107Q9UII5 783 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-202ENST00000380833 CES1P1Q9UKY3 287 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 SLC45A2Q9UMX9 530 aa9.57□□□□□ -0.88
CLCN4-202ENST00000380833 H3BUT2 72 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 M0R135 149 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 APOMO95445 188 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ACVR1Q04771 509 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 MEF2CQ06413 473 aaPredicted RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 DCAF10Q5QP82 559 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ADAMTSL4Q6UY14 1074 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 MZB1Q8WU39 189 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ERGIC1Q969X5 290 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF799Q96GE5 643 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SPSB2Q99619 263 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ACTL6AO96019 429 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 CD74P04233 296 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 RPL27P61353 136 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 TRA2BP62995 288 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 RNF165Q6ZSG1 346 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 OR10G4Q8NGN3 311 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 OR10G9Q8NGN4 311 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 OR10G7Q8NGN6 311 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 HSD17B10Q99714 261 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ICAM5Q9UMF0 924 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SLC25A26Q70HW3 274 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms