RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ATOH1Q92858 354 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 KIAA2026Q5HYC2 2103 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 A8MWL6 223 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 HRO43593 1189 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 GFRALQ6UXV0 394 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 ABHD14AQ9BUJ0 271 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF665Q9H7R5 613 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CKS2P33552 79 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 MPV17LQ2QL34 196 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 TIMP4Q99727 224 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CEP250Q9BV73 2442 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 TMEM255AQ5JRV8 349 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 BAHD1Q8TBE0 780 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 OIT3Q8WWZ8 545 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 FBXO17Q96EF6 278 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 ZMIZ1Q9ULJ6 1067 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 PDCD6O75340 191 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF107Q9UII5 783 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 NUDT16L1Q9BRJ7 211 aaKnown RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CLPPQ16740 277 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF296Q8WUU4 475 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 FGF14Q92915 247 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 SARGQ9BW04 601 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 OR3A4PP47883 348 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CXorf67Q86X51 503 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-205ENST00000376636 OR4C13Q8NGP0 309 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 PLPPR5Q32ZL2 321 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 TMEM52BQ4KMG9 183 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 LINC00596Q86U02 117 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 DIRC2Q96SL1 478 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CACNA1IQ9P0X4 2223 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 IL19Q9UHD0 177 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 CDX4O14627 284 aaPredicted RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 RAC3P60763 192 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 DPTQ07507 201 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 MRPL30Q8TCC3 161 aaKnown RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 C10orf35Q96D05 121 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 STARD10Q9Y365 291 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 TRGV8A0A0C4DH27 118 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF345Q14585 488 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ABHD3Q8WU67 409 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PEF1Q9UBV8 284 aaKnown RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CACNG7P62955 275 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ISOC2Q96AB3 205 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF707Q96C28 371 aaPredicted RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 LINC00052Q96N35 136 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PSMG3Q9BT73 122 aaPredicted RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PPT2Q9UMR5 302 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 SPINK9Q5DT21 86 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 LEUTXA8MZ59 168 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PRSS2P07478 247 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CCR5P51681 352 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ROM1Q03395 351 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 TCTN3Q6NUS6 607 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 IGHV3-20A0A0C4DH32 117 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CAPZBP47756 277 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PRSS36Q5K4E3 855 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 SSC5DA1L4H1 1573 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 IGKV6D-21A0A0A0MT36 114 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 CEACAM16Q2WEN9 425 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF880Q6PDB4 577 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF441Q8N8Z8 693 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 KCNAB3O43448 404 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PMELP40967 661 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 SLC25A42Q86VD7 318 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 PLEKHB1Q9UF11 243 aaPredicted RBP10.34□□□□□ -0.75
VPS13A-205ENST00000376636 KCNMB1Q16558 191 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 C10orf128Q5T292 105 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF384Q8TF68 577 aa10.34□□□□□ -0.75
VPS13A-205ENST00000376636 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 DOCK5Q9H7D0 1870 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ABLIM3O94929 683 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 EPPINO95925 133 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 HOXC4P09017 264 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 TNFSF10P50591 281 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 SLC26A1Q9H2B4 701 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 VDAC1P21796 283 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 TNFAIP6P98066 277 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 MORN1Q5T089 497 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 FOXB1Q99853 325 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms