RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NDUFA6P56556 154 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 PIGYQ3MUY2 71 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 SMIM3Q9BZL3 60 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 TUBA4BQ9H853 241 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 DNAJC13O75165 2243 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 SFTPBP07988 381 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 MCEMP1Q8IX19 187 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 OSR2Q8N2R0 312 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 PRO1933Q9H354 126 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 CHATP28329 748 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 RAB5CP51148 216 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 S100A10P60903 97 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
MSH5-202ENST00000375740 NSUN5P2Q63ZY6 315 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 CALHM1Q8IU99 346 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 OR10D4PQ8NGN7 298 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 OPRM1P35372 400 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
MSH5-202ENST00000375740 PDCD1Q15116 288 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 DYRK2Q92630 601 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 ZNF2Q9BSG1 426 aaPredicted RBP12.03□□□□□ -0.48
MSH5-202ENST00000375740 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
MSH5-202ENST00000375740 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 ST3GAL6Q9Y274 331 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 MMP24Q9Y5R2 645 aa12.03□□□□□ -0.48
MSH5-202ENST00000375740 A0A1B0GV50 99 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
MSH5-202ENST00000375740 RAB1AP62820 205 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 ARG2P78540 354 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 GAMTQ14353 236 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 MIDNQ504T8 468 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 OR10AD1Q8NGE0 317 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 PARP11Q9NR21 331 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 DOK5Q9P104 306 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 PRSS50Q9UI38 385 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 RRP8O43159 456 aaKnown RBP12.02□□□□□ -0.49
MSH5-202ENST00000375740 KNG1P01042 644 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 RPS2P15880 293 aaKnown RBP12.02□□□□□ -0.49
MSH5-202ENST00000375740 SURF2Q15527 256 aaPredicted RBP12.02□□□□□ -0.49
MSH5-202ENST00000375740 ZNF766Q5HY98 468 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 TMPRSS7Q7RTY8 843 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 PIP4P1Q86T03 277 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 BATF2Q8N1L9 274 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 OR56B2PQ8NGI1 322 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 CD300LFQ8TDQ1 290 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 MALSU1Q96EH3 234 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 C12orf49Q9H741 205 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 CRIM1Q9NZV1 1036 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 STARD10Q9Y365 291 aa12.02□□□□□ -0.49
MSH5-202ENST00000375740 UMAD1C9J7I0 102 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 C1QL1O75973 258 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 HKR1P10072 659 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 COX5BP10606 129 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 LYL1P12980 280 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 GUK1Q16774 197 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 TMEM268Q5VZI3 342 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 WDYHV1Q96HA8 205 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 EIF5A2Q9GZV4 153 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 RAB18Q9NP72 206 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 FAM221AA4D161 298 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 ZNF727A8MUV8 499 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 SLC31A2O15432 143 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 NGFP01138 241 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 OR13C7P0DN81 318 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 ARR3P36575 388 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 SNCAP37840 140 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 NPBWR2P48146 333 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 CYB5R2Q6BCY4 276 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 ZNF611Q8N823 705 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 LIME1Q9H400 295 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 OPA3Q9H6K4 179 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 METTL8Q9H825 291 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 GAR1Q9NY12 217 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 SPRR3Q9UBC9 169 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
MSH5-202ENST00000375740 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
MSH5-202ENST00000375740 TRGV5A0A0B4J1U4 118 aa12□□□□□ -0.49
MSH5-202ENST00000375740 TSPAN15O95858 294 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms