RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 PLEKHA2Q9HB19 425 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 FPR2P25090 351 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 ZFP36L2P47974 494 aaKnown RBP8.61□□□□□ -1.03
COL4A6-202ENST00000372216 CLDN20P56880 219 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 ROM1Q03395 351 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 OR8D4Q8NGM9 314 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 RHOFQ9HBH0 211 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 SULT1A2P50226 295 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 SNX22Q96L94 193 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 MS4A10Q96PG2 267 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 SLC17A5Q9NRA2 495 aa8.61□□□□□ -1.03
COL4A6-202ENST00000372216 A0A1B0GUH1 482 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 PNPP00491 289 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 FGF2P09038 288 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 ATP5SQ99766 215 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 OR4C46A6NHA9 309 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 LSM6P62312 80 aaKnown RBP8.6□□□□□ -1.03
COL4A6-202ENST00000372216 PAFAH1B2P68402 229 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 FHL5Q5TD97 284 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 TMEM204Q9BSN7 226 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 SLC7A10Q9NS82 523 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 IL17BQ9UHF5 180 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 TINAGQ9UJW2 476 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 U3KQ87 197 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 GREM1O60565 184 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 HAND1O96004 215 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 FBP1P09467 338 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 KCNMB1Q16558 191 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 LINC00303Q3SY05 128 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 ADAMTS17Q8TE56 1095 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 GUCD1Q96NT3 240 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-202ENST00000372216 AKIRIN1Q9H9L7 192 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-202ENST00000372216 RNF7Q9UBF6 113 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 INSIG2Q9Y5U4 225 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 PARP14Q460N5 1801 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 PLAUP00749 431 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 VDAC1P21796 283 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 GNG4P50150 75 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 SLC23A3Q6PIS1 610 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 C19orf35Q6ZS72 473 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 MDP1Q86V88 176 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 DYRK2Q92630 601 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 TMEM74BQ9NUR3 256 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 TMEM38BQ9NVV0 291 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 MRM2Q9UI43 246 aaKnown RBP8.6□□□□□ -1.03
COL4A6-202ENST00000372216 ARID1BQ8NFD5 2236 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-202ENST00000372216 KIF13BQ9NQT8 1826 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 IGHA2P01877 340 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 HMGA2P52926 109 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 EMP1P54849 157 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 FAM219AQ8IW50 185 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 LSMEM1Q8N8F7 131 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 ZNF485Q8NCK3 441 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 OR5A2Q8NGI9 324 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 SLC25A40Q8TBP6 338 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 MAP6Q96JE9 813 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 SOSTQ9BQB4 213 aa8.6□□□□□ -1.03
COL4A6-202ENST00000372216 FGF5P12034 268 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ACAA2P42765 397 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 KRTCAP3Q53RY4 240 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 FBXW9Q5XUX1 488 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 A0A1W2PN81 502 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 PDCD6O75340 191 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 LIMS3P0CW19 117 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 LIMS4P0CW20 117 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 CHRNA7P36544 502 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ETFRF1Q6IPR1 90 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 INO80CQ6PI98 192 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 FAM222BQ8WU58 562 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ZNF586Q9NXT0 402 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 MYO7AQ13402 2215 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 PRSS1P07477 247 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ASCL5Q7RTU5 278 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 RBPMSQ93062 196 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 YTHDF2Q9Y5A9 579 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 IGKV1D-16P01601 117 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ACSM4P0C7M7 580 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 CCL8P80075 99 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ENDOGQ14249 297 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 BAK1Q16611 211 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 TMEM128Q5BJH2 165 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ATP1A1-AS1Q5TC04 95 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 C17orf47Q8NEP4 570 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ZCCHC14Q8WYQ9 949 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 PARD6AQ9NPB6 346 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 CES1P1Q9UKY3 287 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 CTAG2O75638 210 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 FUCA1P04066 466 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 NAT2P11245 290 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 GPR6P46095 362 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms