RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
SSR4-204ENST00000370087 ALMS1Q8TCU4 4167 aa12.03□□□□□ -0.48
SSR4-204ENST00000370087 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 H3BNX3 289 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 PRKYO43930 277 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 BAG2O95816 211 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 GPR12P47775 334 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 DAPP51397 102 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.49
SSR4-204ENST00000370087 SPIN3Q5JUX0 258 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 ASPHD1Q5U4P2 390 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 CATSPERDQ86XM0 798 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 FOXRED2Q8IWF2 684 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 PQLC1Q8N2U9 271 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 OR4D6Q8NGJ1 314 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 OR9G1Q8NH87 305 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 RFT1Q96AA3 541 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 HMG20AQ9NP66 347 aa12.02□□□□□ -0.49
SSR4-204ENST00000370087 EXOSC4Q9NPD3 245 aaKnown RBP12.02□□□□□ -0.49
SSR4-204ENST00000370087 J3QR06 171 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 SYT7O43581 403 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 GATBO75879 557 aaKnown RBP12.01□□□□□ -0.49
SSR4-204ENST00000370087 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 CDX1P47902 265 aaPredicted RBP12.01□□□□□ -0.49
SSR4-204ENST00000370087 CRISP1P54107 249 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 CDC42P60953 191 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 CFHR3Q02985 330 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 GPR50Q13585 617 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 PNLIPRP3Q17RR3 467 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 KRBOX4Q5JUW0 171 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 KDM4DQ6B0I6 523 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 CITED4Q96RK1 184 aa12.01□□□□□ -0.49
SSR4-204ENST00000370087 IGHV3-72A0A0B4J1Y9 119 aa12□□□□□ -0.49
SSR4-204ENST00000370087 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
SSR4-204ENST00000370087 SLC33A1O00400 549 aaPredicted RBP12□□□□□ -0.49
SSR4-204ENST00000370087 HCKP08631 526 aa12□□□□□ -0.49
SSR4-204ENST00000370087 CGB3P0DN86 165 aa12□□□□□ -0.49
SSR4-204ENST00000370087 CGB7P0DN87 165 aa12□□□□□ -0.49
SSR4-204ENST00000370087 GNG10P50151 68 aa12□□□□□ -0.49
SSR4-204ENST00000370087 FOXE3Q13461 319 aa12□□□□□ -0.49
SSR4-204ENST00000370087 CXorf66Q5JRM2 361 aaPredicted RBP12□□□□□ -0.49
SSR4-204ENST00000370087 Q6P435 159 aa12□□□□□ -0.49
SSR4-204ENST00000370087 PRSS35Q8N3Z0 413 aa12□□□□□ -0.49
SSR4-204ENST00000370087 C4orf3Q8WVX3 66 aa12□□□□□ -0.49
SSR4-204ENST00000370087 EME1Q96AY2 570 aa12□□□□□ -0.49
SSR4-204ENST00000370087 ADAT3Q96EY9 351 aaPredicted RBP12□□□□□ -0.49
SSR4-204ENST00000370087 TBX5Q99593 518 aa12□□□□□ -0.49
SSR4-204ENST00000370087 CIB1Q99828 191 aa12□□□□□ -0.49
SSR4-204ENST00000370087 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
SSR4-204ENST00000370087 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
SSR4-204ENST00000370087 GLS2Q9UI32 602 aa12□□□□□ -0.49
SSR4-204ENST00000370087 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
SSR4-204ENST00000370087 SORL1Q92673 2214 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 LOC107986453A0A1B0GWG9 222 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 A0A1W2PPE3 182 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 AP4M1O00189 453 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 CCRL2O00421 344 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 SH2D1BO14796 132 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 CSN2P05814 226 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 RBP2P50120 134 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 ALDH3A2P51648 485 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 SCN1BQ07699 218 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 PDZK1IP1Q13113 114 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 LTC4SQ16873 150 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 FAM53AQ6NSI3 398 aaPredicted RBP11.99□□□□□ -0.49
SSR4-204ENST00000370087 RDH10Q8IZV5 341 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 Q8N6K4 173 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 YIPF7Q8N8F6 280 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 Q8N9W7 124 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 OR13A1Q8NGR1 328 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 EAF1Q96JC9 268 aaPredicted RBP11.99□□□□□ -0.49
SSR4-204ENST00000370087 SPACA5Q96QH8 159 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 HSPB9Q9BQS6 159 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 ABCG5Q9H222 651 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 CLN6Q9NWW5 311 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 PSG11Q9UQ72 335 aa11.99□□□□□ -0.49
SSR4-204ENST00000370087 FUOMA2VDF0 154 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 ZNF670-ZNF695F2Z2N8 137 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 HSPB6O14558 160 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 ZNF44P15621 663 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 GLP1RP43220 463 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 KIR3DL2P43630 455 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 REG1BP48304 166 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 ATP1B3P54709 279 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 MTCP1P56278 107 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 MADCAM1Q13477 382 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 PTGES3Q15185 160 aaKnown RBP11.98□□□□□ -0.49
SSR4-204ENST00000370087 RCN1Q15293 331 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
SSR4-204ENST00000370087 OR8H3Q8N146 312 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 DNAAF1Q8NEP3 725 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 OR5D18Q8NGL1 313 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 RNF166Q96A37 237 aaPredicted RBP11.98□□□□□ -0.49
SSR4-204ENST00000370087 GNB4Q9HAV0 340 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
SSR4-204ENST00000370087 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms