RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FAM90A15PP0C7V4 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A13PP0C7W8 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A14PP0C7W9 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A24PP0C7X0 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 CCL3L1P16619 93 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 CHATP28329 748 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 P2RX3P56373 397 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
TPM3-211ENST00000368531 ZNF273Q14593 569 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 IL17RELQ6ZVW7 336 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM89BQ8N5H3 189 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 LY6G5BQ8NDX9 201 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 CCDC107Q8WV48 283 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 BCL7BQ9BQE9 202 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 SULT4A1Q9BR01 284 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 MRI1Q9BV20 369 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 PLEKHJ1Q9NW61 149 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 ETAA1Q9NY74 926 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 ABRACLQ9P1F3 81 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 RSL24D1Q9UHA3 163 aaKnown RBP11.46□□□□□ -0.57
TPM3-211ENST00000368531 KIF25Q9UIL4 384 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.45□□□□□ -0.588e-7■■■■□ 20.9
TPM3-211ENST00000368531 MEIKINA0A087WXM9 373 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 TRBV23-1A0A0A0MS06 115 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 FUOMA2VDF0 154 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 METTL21EPA6NDL7 271 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 AVPP01185 164 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 DLX1P56177 255 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 PAX8Q06710 450 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 RBM39Q14498 530 aaKnown RBP11.45□□□□□ -0.58
TPM3-211ENST00000368531 Q6ZTK2 550 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 DTX3Q8N9I9 347 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 C8orf46Q8TAG6 207 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 DACT3Q96B18 629 aaPredicted RBP11.45□□□□□ -0.58
TPM3-211ENST00000368531 ARHGAP5-AS1Q96IT6 56 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 TMPRSS13Q9BYE2 586 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 RBM38Q9H0Z9 239 aaKnown RBP11.45□□□□□ -0.58
TPM3-211ENST00000368531 RHBDL2Q9NX52 303 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 RCC2Q9P258 522 aaKnown RBP11.45□□□□□ -0.58
TPM3-211ENST00000368531 COMMD3Q9UBI1 195 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 SPATA2Q9UM82 520 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 ETV7Q9Y603 341 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 AUP1Q9Y679 476 aa11.45□□□□□ -0.58
TPM3-211ENST00000368531 FLNAP21333 2647 aaKnown RBP11.45□□□□□ -0.58
TPM3-211ENST00000368531 MAP1AP78559 2803 aaPredicted RBP11.44□□□□□ -0.58
TPM3-211ENST00000368531 hADV38S2A0JD32 116 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ODAMA1E959 279 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 H3BUI4 141 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 TOX4O94842 621 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 CSN2P05814 226 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
TPM3-211ENST00000368531 GATA3P23771 443 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ERP29P30040 261 aaKnown RBP11.44□□□□□ -0.58
TPM3-211ENST00000368531 SOX6P35712 828 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 GLP1RP43220 463 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 KCNJ3P48549 501 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 TMEM50BP56557 158 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ERVFRD-1P60508 538 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 PLAC9Q5JTB6 97 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 METTL11BQ5VVY1 283 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 RSBN1Q5VWQ0 802 aaPredicted RBP11.44□□□□□ -0.58
TPM3-211ENST00000368531 TCF23Q7RTU1 214 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 SAMD12Q8N8I0 201 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 OR10R2Q8NGX6 335 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 OR4K15Q8NH41 348 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 PTX4Q96A99 478 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 SLC25A38Q96DW6 304 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 RAB3CQ96E17 227 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 WDFY2Q96P53 400 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 PECRQ9BY49 303 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ZMAT3Q9HA38 289 aaKnown RBP11.44□□□□□ -0.58
TPM3-211ENST00000368531 CELSR1Q9NYQ6 3014 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 VPS13CQ709C8 3753 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 ACANP16112 2415 aa11.44□□□□□ -0.58
TPM3-211ENST00000368531 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 TMEM30CPA0ZSE6 113 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 INAFM1C9JVW0 142 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 J3QLI3 93 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 RAB27BO00194 218 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 GNB3P16520 340 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 SCAND1P57086 179 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 MEF2CQ06413 473 aaPredicted RBP11.43□□□□□ -0.58
TPM3-211ENST00000368531 FAM189A2Q15884 450 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 FAM120AOSQ5T036 256 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 SLC35E4Q6ICL7 350 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 C1orf229Q6ZS94 237 aaPredicted RBP11.43□□□□□ -0.58
TPM3-211ENST00000368531 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 CMTM4Q8IZR5 234 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 DYNC2LI1Q8TCX1 351 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 MRGPRDQ8TDS7 321 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms