RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 DYNLT3P51808 116 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 ZIC1Q15915 447 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 C1orf53Q5VUE5 145 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 ANXA10Q9UJ72 324 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 DHRS2Q13268 280 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 MUC15Q8N387 334 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 TOLLIPQ9H0E2 274 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 SELENOPP49908 381 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 COX19Q49B96 90 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 PRSS54Q6PEW0 395 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 TMEM88Q6PEY1 159 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 VN1R4Q7Z5H5 301 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 SLC35B3Q9H1N7 401 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 PAPPA2Q9BXP8 1791 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 A0A1B0GTH9 108 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 FBXW9Q5XUX1 488 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 STARD4Q96DR4 205 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 NAT8Q9UHE5 227 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 MYH15Q9Y2K3 1946 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 DRD3P35462 400 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 P2RY1P47900 373 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 OR1L8Q8NGR8 309 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 MYOZ3Q8TDC0 251 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 FAM222BQ8WU58 562 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 MIEN1Q9BRT3 115 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 SIRT5Q9NXA8 310 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 NQO2P16083 231 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 TMEM191AQ9H0A3 160 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 WDR13Q9H1Z4 485 aa13.82□□□□□ -0.2
NUCKS1-201ENST00000367142 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 SURF2Q15527 256 aaPredicted RBP13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 RNF165Q6ZSG1 346 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 MAP1LC3CQ9BXW4 147 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 FGF9P31371 208 aaPredicted RBP13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 HLA-DRB3P79483 266 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 STPG1Q5TH74 334 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 OR1L6Q8NGR2 347 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 TTTY12Q9BZ98 90 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 SRD5A3Q9H8P0 318 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 SS18L1O75177 396 aaPredicted RBP13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 FAM106CPP0CH98 169 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 CCL3P10147 92 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 RNFT1Q5M7Z0 435 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 ANAPC16Q96DE5 110 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 MS4A10Q96PG2 267 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 FAM60AQ9NP50 221 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 HIGD1AQ9Y241 93 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 A0A1B0GTL3 188 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 PRR35P0CG20 571 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 DAOP14920 347 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 CSF2RBP32927 897 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 MPV17LQ2QL34 196 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 Q9N2K0 584 aa13.81□□□□□ -0.2
NUCKS1-201ENST00000367142 SYNGR1O43759 233 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 SHISA5Q8N114 240 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 NRAPQ86VF7 1730 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 GABRA6Q16445 453 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 MRM1Q6IN84 353 aaKnown RBP13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 A0A1W2PS18 150 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 CLDN18P56856 261 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 SPANXN1Q5VSR9 72 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 AKIP1Q9NQ31 210 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 TMEM38BQ9NVV0 291 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 CYB5R1Q9UHQ9 305 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 LIFP15018 202 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 PLAURQ03405 335 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 HSD17B13Q7Z5P4 300 aaPredicted RBP13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 GHITMQ9H3K2 345 aa13.8□□□□□ -0.2
NUCKS1-201ENST00000367142 C11orf94C9JXX5 98 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 GEMIN2O14893 280 aaKnown RBP13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 RD3LP0DJH9 198 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 ELOBQ15370 118 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 TEX30Q5JUR7 227 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 AMMECR1LQ6DCA0 310 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 THSD4Q6ZMP0 1018 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 OR5A2Q8NGI9 324 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 PARP11Q9NR21 331 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 CA11O75493 328 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 PNLIPP16233 465 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 GZMKP49863 264 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 PRSS12P56730 875 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 SRSF9Q13242 221 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 CD300LDQ6UXZ3 194 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 MDP1Q86V88 176 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms