RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CLDN34H7C241 214 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 CELA2AP08217 269 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 RPS4Y1P22090 263 aaKnown RBP11.59□□□□□ -0.55
SCN8A-202ENST00000355133 ACP1P24666 158 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 AESQ08117 197 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 IL24Q13007 206 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 RPS4Y2Q8TD47 263 aa11.59□□□□□ -0.55
SCN8A-202ENST00000355133 RP1L1Q8IWN7 2480 aaPredicted RBP11.58□□□□□ -0.55
SCN8A-202ENST00000355133 STRCQ7RTU9 1775 aa11.58□□□□□ -0.55
SCN8A-202ENST00000355133 J3QT63 122 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 ZP3P21754 424 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 G0S2P27469 103 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 G6PCP35575 357 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 SPCS3P61009 180 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 RNF2Q99496 336 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 C12orf57Q99622 126 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 MS4A5Q9H3V2 200 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 COL18A1P39060 1754 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 GZMHP20718 246 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 ASCL5Q7RTU5 278 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 RSRP1Q9BUV0 290 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 ASCL3Q9NQ33 180 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 IGHV3-21A0A0B4J1V1 117 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 BMPR1BO00238 502 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 REG1BP48304 166 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 ECSCRQ19T08 205 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 INO80CQ6PI98 192 aaPredicted RBP11.58□□□□□ -0.56
SCN8A-202ENST00000355133 WFDC3Q8IUB2 231 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 SLC7A10Q9NS82 523 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 CA10Q9NS85 328 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 C1RLQ9NZP8 487 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 SCN1AP35498 2009 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 TEX50A0A1B0GTY4 177 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 PMS2CLQ68D20 193 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 OR4P4Q8NGL7 312 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 FLYWCH2Q96CP2 140 aaKnown RBP11.58□□□□□ -0.56
SCN8A-202ENST00000355133 C10orf35Q96D05 121 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 DCAF16Q9NXF7 216 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 TECRQ9NZ01 308 aaKnown RBP11.58□□□□□ -0.56
SCN8A-202ENST00000355133 CLN8Q9UBY8 286 aa11.58□□□□□ -0.56
SCN8A-202ENST00000355133 PPYP01298 95 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 HLA-GP17693 338 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 ERVS71-1P61550 626 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 PSG5Q15238 335 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 ATP5SQ99766 215 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 VPS25Q9BRG1 176 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 OR2J1Q9GZK6 312 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 NEU3Q9UQ49 428 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 STPG1Q5TH74 334 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 C10orf111Q8N326 155 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 CENPVL1A0A0U1RR11 272 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 CSN3P07498 182 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 RAG2P55895 527 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 TCL1AP56279 114 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 TOLLIPQ9H0E2 274 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 CCL27Q9Y4X3 112 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 RNF212Q495C1 297 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 FAM219AQ8IW50 185 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 MRGPRFQ96AM1 343 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 OPN3Q9H1Y3 402 aaPredicted RBP11.57□□□□□ -0.56
SCN8A-202ENST00000355133 SEMA7AO75326 666 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 RNF224P0DH78 156 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 C1orf185Q5T7R7 199 aa11.57□□□□□ -0.56
SCN8A-202ENST00000355133 OR4C45A6NMZ5 311 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 IGKV1D-16P01601 117 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 NAAAQ02083 359 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 DGAT2L7PQ6IED9 249 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 TMEM171Q8WVE6 324 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 RNF133Q8WVZ7 376 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 MRPL24Q96A35 216 aaKnown RBP11.56□□□□□ -0.56
SCN8A-202ENST00000355133 IL11P20809 199 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 P2RY1P47900 373 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 OR5A2Q8NGI9 324 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 ZPLD1Q8TCW7 415 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 ZNF501Q96CX3 271 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-202ENST00000355133 LIPGQ9Y5X9 500 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 UPK3AO75631 287 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
SCN8A-202ENST00000355133 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
SCN8A-202ENST00000355133 COL10A1Q03692 680 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 SLC22A18ASQ8N1D0 253 aa11.56□□□□□ -0.56
SCN8A-202ENST00000355133 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-202ENST00000355133 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms