RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CCL15Q16663 113 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF774Q6NX45 483 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MED27Q6P2C8 311 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PEX26Q7Z412 305 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CYP4Z2PQ8N1L4 340 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 FAM222BQ8WU58 562 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RCN3Q96D15 328 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 OR52B2Q96RD2 323 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 LINC01587Q99440 93 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 SHCBP1LQ9BZQ2 653 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 COA1Q9GZY4 146 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 SLC40A1Q9NP59 571 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MRPL40Q9NQ50 206 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MMP26Q9NRE1 261 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 C1orf109Q9NX04 203 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PSG11Q9UQ72 335 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TRAV8-6A0A0B4J262 113 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 A0A1B0GXF2 115 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GMNCA6NCL1 334 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CLDN34H7C241 214 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MYO1DO94832 1006 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 NOVP48745 357 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GFERP55789 205 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TAS2R60P59551 318 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 UBE2IP63279 158 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PMVKQ15126 192 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 NIPAL1Q6NVV3 410 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 OPN5Q6U736 354 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 WDFY1Q8IWB7 410 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 C14orf178Q8N769 122 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GATD1Q8NB37 220 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 OR6N1Q8NGY5 312 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PIFOQ8TCI5 191 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 DNAJC9Q8WXX5 260 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CLDN23Q96B33 292 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GALNT14Q96FL9 552 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CHMP6Q96FZ7 201 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MRAP2Q96G30 205 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 UGT2B28Q9BY64 529 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF436Q9C0F3 470 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 HDHD2Q9H0R4 259 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MFSD1Q9H3U5 465 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 C12orf4Q9NQ89 552 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PLEKHJ1Q9NW61 149 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ANXA10Q9UJ72 324 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ARL2BPQ9Y2Y0 163 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TBL2Q9Y4P3 447 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CSAG2Q9Y5P2 127 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 WDR87Q6ZQQ6 2873 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CROCCQ5TZA2 2017 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 LRP4O75096 1905 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TRAV8-4A0A0B4J246 113 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 F5H768 121 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 INS-IGF2F8WCM5 200 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 H7C0C1 242 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TNFRSF11BO00300 401 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 HMGB3O15347 200 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CA11O75493 328 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GLSO94925 669 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 SLC25A27O95847 323 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 P01737 135 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 OR5AL1P0C617 328 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PRB4P10163 310 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CD28P10747 220 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ADRB3P13945 408 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 UGT2B7P16662 529 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RAB3BP20337 219 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ADORA1P30542 326 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PPP1R2P41236 205 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CYB561P49447 251 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 KRTAP10-6P60371 365 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZCWPW2Q504Y3 356 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RSBN1Q5VWQ0 802 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF530Q6P9A1 599 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 FAM151BQ6UXP7 276 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MYPOPQ86VE0 399 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 LINC00612Q8N6U2 182 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF433Q8N7K0 673 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 OR8K1Q8NGG5 319 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 SGMS2Q8NHU3 365 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ERMNQ8TAM6 284 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RXFP4Q8TDU9 374 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RERGQ96A58 199 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 S100PBPQ96BU1 408 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RDH12Q96NR8 316 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TAAR1Q96RJ0 339 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 VAT1Q99536 393 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CDCA4Q9BXL8 241 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 DHX35Q9H5Z1 703 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TRIM45Q9H8W5 580 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 PLGRKTQ9HBL7 147 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 SND1-IT1Q9HBX3 110 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 NYAP2Q9P242 653 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF225Q9UK10 706 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF706Q9Y5V0 76 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 NUP155O75694 1391 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ERI2A8K979 691 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 KRBOX1C9JBD0 128 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 KPNA4O00629 521 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms