RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF616Q08AN1 781 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 CD300LFQ8TDQ1 290 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 EXTL1Q92935 676 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 BCL2L14Q9BZR8 327 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 SIRPB1O00241 398 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF16P17020 682 aaPredicted RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 PTGER4P35408 488 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 F2RL1P55085 397 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 PLPPR2Q96GM1 343 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 CDH20Q9HBT6 801 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 TERTO14746 1132 aaKnown RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 FCGR3AP08637 254 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 SUPT4H1P63272 117 aaKnown RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 FOXF2Q12947 444 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 CLINT1Q14677 625 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 PNLIPRP3Q17RR3 467 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 ARRDC1Q8N5I2 433 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 LINC00469Q8N7U9 141 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 ZFP62Q8NB50 900 aaPredicted RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
TRIM4-201ENST00000349062 OCSTAMPQ9BR26 566 aa11.94□□□□□ -0.5
TRIM4-201ENST00000349062 HSD17B6O14756 317 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 MSTNO14793 375 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 CD8AP01732 235 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 HOXC12P31275 282 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 WNT5AP41221 380 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 FBXW9Q5XUX1 488 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 ALX4Q9H161 411 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 IGLV3-1P01715 115 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 ARG1P05089 322 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 CRHP06850 196 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF133P52736 654 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 FAM189A2Q15884 450 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 RPL7L1Q6DKI1 246 aaKnown RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 FAM89BQ8N5H3 189 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 HPSE2Q8WWQ2 592 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 FGF23Q9GZV9 251 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-201ENST00000349062 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 hCG_1809904A0A1W2PP81 198 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 A0A1W2PR64 198 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 A0A1W2PRV1 198 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 SCTP09683 121 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 CD37P11049 281 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 NSUN5P2Q63ZY6 315 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 GSN-AS1Q9NRJ2 163 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 GHRLQ9UBU3 117 aa11.93□□□□□ -0.5
TRIM4-201ENST00000349062 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 SFT2D2O95562 160 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 CHATP28329 748 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 GLP1RP43220 463 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF826PQ6ZT77 177 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 SSC4DQ8WTU2 575 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
TRIM4-201ENST00000349062 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 NRIP2Q9BQI9 281 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 DUSP13Q9UII6 198 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 TINAGQ9UJW2 476 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 H0YIZ8 118 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 CDIPTO14735 213 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 FPR2P25090 351 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 LTC4SQ16873 150 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 NCMAPQ5T1S8 102 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
TRIM4-201ENST00000349062 FAM180AQ6UWF9 173 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 OR1J1Q8NGS3 322 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 PHYHIPLQ96FC7 376 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF286AQ9HBT8 521 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 HSPA12AO43301 675 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 AADACP22760 399 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF345Q14585 488 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 C1QTNF5Q9BXJ0 243 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
TRIM4-201ENST00000349062 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 PTPRQQ9UMZ3 2332 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 PDCD6O75340 191 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 NDUFS6O75380 124 aaKnown RBP11.91□□□□□ -0.5
TRIM4-201ENST00000349062 LY86O95711 162 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms