RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 NEK7Q8TDX7 302 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 FAM46BQ96A09 425 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 C1orf147Q96MC9 270 aaPredicted RBP9.78□□□□□ -0.84
SNCA-202ENST00000345009 NEDD4LQ96PU5 975 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 DPCDQ9BVM2 203 aaPredicted RBP9.78□□□□□ -0.84
SNCA-202ENST00000345009 CHST6Q9GZX3 395 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 PPA2Q9H2U2 334 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 FBLN5Q9UBX5 448 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 RAB22AQ9UL26 194 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 TRGV10A0A0A0MS01 117 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 METTL21EPA6NDL7 271 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 M0R1W7 72 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 NOL3O60936 208 aaKnown RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 CRLF1O75462 422 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 TFAP2AP05549 437 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 SRD5A1P18405 259 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 OR3A1P47881 315 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 ALDH3B2P48448 385 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 P2RX3P56373 397 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 OR10A3P58181 314 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 LSM3P62310 102 aaKnown RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 ARF6P62330 175 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 RPS27AP62979 156 aaKnown RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 MXD1Q05195 221 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 PDCD1Q15116 288 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 KRBOX4Q5JUW0 171 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 TRAPPC6BQ86SZ2 158 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 ANKRD13BQ86YJ7 626 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 SUMF2Q8NBJ7 301 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 OR4M1Q8NGD0 313 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 OR51D1Q8NGF3 324 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 SLC25A28Q96A46 364 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 PTX4Q96A99 478 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 DACT3Q96B18 629 aaPredicted RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 Q96M66 194 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 WDFY2Q96P53 400 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 GFI1Q99684 422 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 TMPRSS13Q9BYE2 586 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 NCOR1P1Q9H4R4 102 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 METTL8Q9H825 291 aaKnown RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 LIN7BQ9HAP6 207 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 OR6C3Q9NZP0 311 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 DAPK2Q9UIK4 370 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 PEX16Q9Y5Y5 336 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 MXRA5Q9NR99 2828 aa9.77□□□□□ -0.85
SNCA-202ENST00000345009 FN1P02751 2386 aaKnown RBP9.77□□□□□ -0.85
SNCA-202ENST00000345009 TRAV24A0A0B4J272 114 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 A0A1W2PP11 408 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 SHISA3A0PJX4 238 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 TMEM14DPA8MWL7 114 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 HSPB6O14558 160 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 CA11O75493 328 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 IL1AP01583 271 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 CLDN12P56749 244 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 SCAND1P57086 179 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 BPIFB3P59826 476 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 AESQ08117 197 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 GPR107Q5VW38 600 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 NCR3LG1Q68D85 454 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 TMEM200BQ69YZ2 307 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 RAB12Q6IQ22 244 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 SFXN4Q6P4A7 337 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 FGFRL1Q8N441 504 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 UPRTQ96BW1 309 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 GAL3ST2Q9H3Q3 398 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 RAB9BQ9NP90 201 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 C19orf12Q9NSK7 152 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 UBE2J1Q9Y385 318 aaPredicted RBP9.76□□□□□ -0.85
SNCA-202ENST00000345009 LINC00312Q9Y6C7 94 aa9.76□□□□□ -0.85
SNCA-202ENST00000345009 MEIKINA0A087WXM9 373 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 TMEM30CPA0ZSE6 113 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 ODAMA1E959 279 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 PDCD6O75340 191 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 FCN3O75636 299 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 SCGNO76038 276 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 RBP4P02753 201 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 RAB6AP20340 208 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 FPR2P25090 351 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 BLVRBP30043 206 aaPredicted RBP9.75□□□□□ -0.85
SNCA-202ENST00000345009 SERPINB10P48595 397 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 QRFPP83859 136 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 PAX5Q02548 391 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 ATXN7L3Q14CW9 347 aaPredicted RBP9.75□□□□□ -0.85
SNCA-202ENST00000345009 ARL6IP1Q15041 203 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 IDNKQ5T6J7 187 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 GPR157Q5UAW9 335 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 OR10K2Q6IF99 312 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 BPIFB2Q8N4F0 458 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 OR56B1Q8NGI3 324 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 RAB2BQ8WUD1 216 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 ZNF714Q96N38 554 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 BCL7BQ9BQE9 202 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 HEXA-AS1Q9H8Q6 139 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms