RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 OR4X1Q8NH49 305 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 RNF24Q9Y225 148 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 CCR5P51681 352 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
CUL3-202ENST00000344951 HSF4Q9ULV5 492 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 SHROOM3Q8TF72 1996 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 PTGFRP43088 359 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 CT55Q8WUE5 264 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 TMEM127O75204 238 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
CUL3-202ENST00000344951 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
CUL3-202ENST00000344951 ZNF250P15622 560 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 GABRG2P18507 467 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 CXCL3P19876 107 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 HOXC8P31273 242 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 C19orf48Q6RUI8 117 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 R3HDM4Q96D70 268 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 PHYHIPLQ96FC7 376 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 SPAARA0A1B0GVQ0 90 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 MPC2O95563 127 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 C1orf210Q8IVY1 113 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 TCTEX1D1Q8N7M0 179 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 NEIL1Q96FI4 390 aaPredicted RBP13.29□□□□□ -0.28
CUL3-202ENST00000344951 MOB4Q9Y3A3 225 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 ANKRD20A5PA0PJZ0 165 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 HPXP02790 462 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 HERPUD1Q15011 391 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 RNF165Q6ZSG1 346 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 ARRDC1Q8N5I2 433 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 C16orf82Q7Z2V1 217 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 ZNF441Q8N8Z8 693 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 SNX22Q96L94 193 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 CLPPQ16740 277 aaPredicted RBP13.29□□□□□ -0.28
CUL3-202ENST00000344951 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 ZNF552Q9H707 407 aaPredicted RBP13.29□□□□□ -0.28
CUL3-202ENST00000344951 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 GALP22466 123 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 POLR2GP62487 172 aaKnown RBP eCLIP13.29□□□□□ -0.28
CUL3-202ENST00000344951 NCMAPQ5T1S8 102 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 NPAS1Q99742 590 aa13.29□□□□□ -0.28
CUL3-202ENST00000344951 RPP25Q9BUL9 199 aaKnown RBP13.29□□□□□ -0.28
CUL3-202ENST00000344951 AP4M1O00189 453 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 SLC35B1P78383 322 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 GABRA6Q16445 453 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 Q8WTZ3 238 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 RASL12Q9NYN1 266 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
CUL3-202ENST00000344951 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
CUL3-202ENST00000344951 IGSF11Q5DX21 431 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 WSB1Q9Y6I7 421 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 HIKESHIQ53FT3 197 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 OR4B1Q8NGF8 309 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 MRPL13Q9BYD1 178 aaKnown RBP13.28□□□□□ -0.28
CUL3-202ENST00000344951 MIXL1Q9H2W2 232 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 SLC17A5Q9NRA2 495 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 NRAPQ86VF7 1730 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 PF4V1P10720 104 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 COX6B1P14854 86 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 ID1P41134 155 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 MRM1Q6IN84 353 aaKnown RBP13.28□□□□□ -0.28
CUL3-202ENST00000344951 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 TSPAN32Q96QS1 320 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 PNLIPP16233 465 aa13.28□□□□□ -0.28
CUL3-202ENST00000344951 RGS13O14921 159 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 IGF2P01344 180 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 GABRA1P14867 456 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 SLC6A1P30531 599 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 RAG2P55895 527 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 CLDN18P56856 261 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 ZNF815PA8K554 130 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 FAM157CP0CG43 387 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 HIST1H1DP16402 221 aaKnown RBP13.27□□□□□ -0.28
CUL3-202ENST00000344951 HLA-DRB5Q30154 266 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 TMEM251Q8N6I4 163 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 BVESQ8NE79 360 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 GUCD1Q96NT3 240 aa13.27□□□□□ -0.28
CUL3-202ENST00000344951 BEX4Q9NWD9 120 aaPredicted RBP13.27□□□□□ -0.28
CUL3-202ENST00000344951 EPPINO95925 133 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 OR13C6PQ8NH95 151 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 DAOP14920 347 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 SLC25A1P53007 311 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 C10orf113Q5VZT2 155 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 Q8IYB0 196 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 STARD4Q96DR4 205 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 SEC11CQ9BY50 192 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 CDIPTO14735 213 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 FFAR1O14842 300 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 PPP1R17O96001 155 aa13.27□□□□□ -0.29
CUL3-202ENST00000344951 DNAJB12Q9NXW2 375 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms